CACACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCACATGAAATTTAGAATGAAAATCACGAGCAAGGTCGAGGGT
AGGACATGCCAGAAATACAGCAGCCTGTGCTGCCTTATCCACTATGTCAT
TACCCTCAGCCAATGGACCTGGTAACCCAGTATGAGCTCGGATATGCTGA
ACAAAGAAGGGGGAGGACCTACGCAATAGCAAATTTTGTAATTTACTTAA
TAAATCCCCAATGCTGGACCTAAGATTCACCCTACCAACCACCTCCAAGA
TAGCAAGAGCATTAACCACATATTGACTATCTGATATTAAATTAAAGGAT
TCAGAATACAATTCAAAATCTTTAATCACCACCTGCAATTCTATAACTTG
CGGTGAGGCAGGGGAGAATTGTACAACTATAGGCACAGAGCCTTGAACTA
AATAGGCTCTGCATCCTGACTTTGATCCATCTGTAAAAATTAGAGGAGCC
CCTTTCAATGGTACTCAAGAGGTAATCACAGGAAAAATTACCAGGTGAGC
TCTACACAACTGTAAAATAGGATCTTTGGGAAAATGATTATCTATCCTGC
CTAAAAAACTGCATCTTAAAACTGCCCAGTCATCTACAGTGACAGACAAC
ACTTCAACTTGTCTACTATCATATGGTACAATAATTTCATCAGGAGGGGT
GCCAAAATGCTGCATGCAT

NCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCATCAGTTTGTAGGGAAATGGAT
GGATCTGGAAGACACACTGAGTGGGGCAACCCAGGCTCAGAAAGACAGAC
ACCTCTGGTAGAGCTTACTCTCATCAGAGACTCCCAGCTTCTAATTGTTT
TCCTTTTCATTTATTAGAAAATTAACCGTGTGTGCACATGCGTGCATATG
TGTGCCTCAGACATGCGTGTGGAGGTTGGAGGACAATTTTGTGGTGCCTG
GTACCTCCTTCTATCTTTAGGTGACCTAGGGTCAGGTCGCCAGGCTTGTG
TGGAAAGCAATTTTACCCACAGTGGCATTTTGCTGGCCCCTTAGTTTCTA
GTCATTAAACACGCATCACATACACATGTGAGCAATGGCCAGGGAATTAG
AAAGGGGTTCATGAGGTGGGGAGAGTCACAGGCCACATGAGCTGCGAAAG
GGAAGCAGGGTGCTTGGAGGGTGGAAGAGCACAGTGGAGAGAGGAGAAGA
AGGGATAAGGGATGAGAACCACCAAAGCTAAGTGTGTGAGAAAGCGTCAA
AGGATGTCCTCTGTACGCTGAACAACCAACCAACCAACCAACCGGAAAGA
AGGGACCGCGGGAACCAGCCAGTAAGGGAAAGGAGCCTGCGGACAGTTAA
CCTTTAGAAGGGACGAGA

Query= MSMg01no164_n22.g1 MSMg01no164_n22.g1 CHROMAT_FILE:
MSMg01no164_n22.g1 PHD_FILE: MSMg01no164_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:50 2005
         (577 letters)



>mm_chr11_62535455_62536431
          Length = 977

 Score = 1033 bits (534), Expect = 0.0
 Identities = 567/578 (98%), Gaps = 1/578 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   catcagtttgtagggaaatggatggatctggaagacacactgagtggggcaacccaggct 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 200 catcagtttgtagggaaatggatggatctggaagacacactgagtcgggtaacccaggct 259

                                                                       
Query: 61  cagaaagacagacacctctggtagagcttactctcatcagagactcccagcttctaattg 120
           ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 260 cagaaagacagacacctctggtagagctttctctcaccagagactcccagcttctaattg 319

                                                                       
Query: 121 ttttccttttcatttattagaaaattaaccgtgtgtgcacatgcgtgcatatgtgtgcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttttccttttcatttattagaaaattaaccgtgtgtgcacatgcgtgcatatgtgtgcct 379

                                                                       
Query: 181 cagacatgcgtgtggaggttggaggacaattttgtggtgcctggtacctccttctatctt 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 380 cagacatgcgtgtggaggttggaggacaattttgtggtgcctggtatctccttctatttt 439

                                                                       
Query: 241 taggtgacctagggtcaggtcgccaggcttgtgtggaaagcaattttacccacagtggca 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 440 taggtgacctagggtcaggtcgccaggcttgtgtggaaagcaattttacccacagtggta 499

                                                                       
Query: 301 ttttgctggcccctta-gtttctagtcattaaacacgcatcacatacacatgtgagcaat 359
           |||||||||||||||| |||||||||| |||||||||||||||||| | |||||||||||
Sbjct: 500 ttttgctggccccttaagtttctagtcgttaaacacgcatcacatatagatgtgagcaat 559

                                                                       
Query: 360 ggccagggaattagaaaggggttcatgaggtggggagagtcacaggccacatgagctgcg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggccagggaattagaaaggggttcatgaggtggggagagtcacaggccacatgagctgcg 619

                                                                       
Query: 420 aaagggaagcagggtgcttggagggtggaagagcacagtggagagaggagaagaagggat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaagggaagcagggtgcttggagggtggaagagcacagtggagagaggagaagaagggat 679

                                                                       
Query: 480 aagggatgagaaccaccaaagctaagtgtgtgagaaagcgtcaaaggatgtcctctgtac 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aagggatgagaaccaccaaagctaagtgtgtgagaaagcgtcaaaggatgtcctctgtac 739

                                                 
Query: 540 gctgaacaaccaaccaaccaaccaaccggaaagaaggg 577
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gctgaacaaccaaccaaccaaccaaccggaaagaaggg 777


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space:   548289
Effective search space used:   548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)