MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-166H08
Chromosome	11 (Build37)
Map Location	112,948,667 - 112,948,956
singlet/doublet	singlet
Overlap gene	2610035D17Rik
Upstream gene	LOC100041589, LOC100043020, EG668396, EG667038, LOC100041610, LOC671963, LOC667047, BC006965, Sox9
Downstream gene	Slc39a11, Sstr2, Cog1, D11Wsu99e, D11Wsu47e, D11Ertd636e, Cdc42ep4, Sdk2, LOC100041739
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041589 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041589
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100043020 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043020
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG668396 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668396 MGI:3646187
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	EG667038 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667038 MGI:3645286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100041610 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041610
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC671963 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC667047 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667047
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	BC006965 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217294 MGI:2384955
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Sox9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20682 MGI:98371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610035D17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72386 MGI:1919636
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs

name	Slc39a11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69806 MGI:1917056
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sstr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20606 MGI:98328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cog1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16834 MGI:1333873
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D11Wsu99e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28081 MGI:106351
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D11Wsu47e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:276852 MGI:106356
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D11Ertd636e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52670 MGI:1277182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cdc42ep4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56699 MGI:1929760
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sdk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237979 MGI:2443847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041739 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041739
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100043020 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262554 GeneID:100043020
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043020 transcript_id : XM_001480135.1

name	EG668396 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262494 GeneID:668396 MGI:3646187
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : predicted gene, EG668396 transcript_id : XM_001476650.1

name	EG667038 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94390913 GeneID:667038 MGI:3645286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG667038 transcript_id : XM_987895.1

name	LOC100041610 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262496 GeneID:100041610
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100041610 transcript_id : XM_001476685.1

name	LOC671963 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262556 GeneID:671963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical LOC671963 transcript_id : XM_001480141.1

name	LOC667047 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94390915 GeneID:667047
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical LOC667047 transcript_id : XM_987941.1

name	BC006965 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262498 GeneID:217294 MGI:2384955
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : cDNA sequence BC006965 transcript_id : XM_001476709.1

name	Sox9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368547 GeneID:20682 MGI:98371
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SRY-box containing gene 9 transcript_id : NM_011448.3

name	2610035D17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94390920 GeneID:72386 MGI:1919636
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs product : RIKEN cDNA 2610035D17 gene transcript_id : XM_902349.2

name	Slc39a11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803321 GeneID:69806 MGI:1917056
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 39 (metal ion transporter), member 11 transcript_id : NM_027216.4

name	Sstr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110665702 GeneID:20606 MGI:98328
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : somatostatin receptor 2 transcript_id : NM_009217.2

name	Sstr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110665698 GeneID:20606 MGI:98328
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : somatostatin receptor 2 transcript_id : NM_001042606.1

name	Cog1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15011848 GeneID:16834 MGI:1333873
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : component of oligomeric golgi complex 1 transcript_id : NM_013581.2

name	D11Wsu99e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376716 GeneID:28081 MGI:106351
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, Wayne State University 99, expressed transcript_id : NM_138598.3

name	D11Wsu47e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370490 GeneID:276852 MGI:106356
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, Wayne State University 47, expressed transcript_id : NM_177777.4

name	D11Ertd636e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21536223 GeneID:52670 MGI:1277182
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, ERATO Doi 636, expressed transcript_id : NM_026682.1

name	D11Ertd636e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21536231 GeneID:52670 MGI:1277182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, ERATO Doi 636, expressed transcript_id : NM_029794.1

name	Cdc42ep4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9910141 GeneID:56699 MGI:1929760
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDC42 effector protein (Rho GTPase binding) 4 transcript_id : NM_020006.1

name	Sdk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254253 GeneID:237979 MGI:2443847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sidekick homolog 2 (chicken) transcript_id : NM_172800.2

name	LOC100041739 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262504 GeneID:100041739
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041739 transcript_id : XM_001476930.1

name	LOC100043020 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262555 GeneID:100043020
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480185.1

name	EG668396 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149262495 GeneID:668396 MGI:3646187
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476700.1

name	EG667038 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94390914 GeneID:667038 MGI:3645286
definition	codon_start : 1 product : hypothetical protein protein_id : XP_992989.1

name	LOC100041610 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262497 GeneID:100041610
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476735.1

name	LOC671963 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262557 GeneID:671963
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480191.1

name	LOC667047 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94390916 GeneID:667047
definition	codon_start : 1 product : hypothetical protein protein_id : XP_993035.1

name	BC006965 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149262499 GeneID:217294 MGI:2384955
definition	codon_start : 1 product : hypothetical protein LOC217294 protein_id : XP_001476759.1

name	Sox9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543761 CCDS:CCDS25595.1 GeneID:20682 MGI:98371
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0001502 - cartilage condensation [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IMP]; GO:0045165 - cell fate commitment [Evidence IGI]; GO:0001708 - cell fate specification [Evidence IMP]; GO:0001837 - epithelial to mesenchymal transition [Evidence IMP]; GO:0001942 - hair follicle development [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0019100 - male germ-line sex determination [Evidence IMP]; GO:0008584 - male gonad development [Evidence IMP]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0014032 - neural crest cell development [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0042981 - regulation of apoptosis [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence TAS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : SRY-box containing gene 9 protein_id : NP_035578.2

name	2610035D17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94390921 GeneID:72386 MGI:1919636
definition	codon_start : 1 product : hypothetical protein LOC72386 protein_id : XP_907442.2

name	Slc39a11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134053868 GeneID:69806 MGI:1917056
definition	codon_start : 1 exception : mismatches in translation product : solute carrier family 39 (metal ion transporter), member 11 protein_id : NP_081492.3

name	Sstr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110665703 CCDS:CCDS25598.1 GeneID:20606 MGI:98328
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0004994 - somatostatin receptor activity [Evidence IDA] [Evidence IMP] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IMP]; GO:0007193 - G-protein signaling, adenylate cyclase inhibiting pathway [Evidence IDA]; GO:0007218 - neuropeptide signaling pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform B is encoded by transcript variant 2 product : somatostatin receptor 2 isoform B protein_id : NP_033243.2

name	Sstr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110665699 GeneID:20606 MGI:98328
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0004994 - somatostatin receptor activity [Evidence IDA] [Evidence IMP] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IMP]; GO:0007193 - G-protein signaling, adenylate cyclase inhibiting pathway [Evidence IDA]; GO:0007218 - neuropeptide signaling pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform A is encoded by transcript variant 1 product : somatostatin receptor 2 isoform A protein_id : NP_001036071.1

name	Cog1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15011849 CCDS:CCDS25599.1 GeneID:16834 MGI:1333873
definition	GO_component : GO:0017119 - Golgi transport complex [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008565 - protein transporter activity [Evidence IEP] GO_process : GO:0007030 - Golgi organization and biogenesis [Evidence ISS]; GO:0006891 - intra-Golgi vesicle-mediated transport [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation function : ldlCp complex assembly note : low density lipoprotein B product : component of oligomeric golgi complex 1 protein_id : NP_038609.2

name	D11Wsu99e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20070414 CCDS:CCDS25600.1 GeneID:28081 MGI:106351
definition	codon_start : 1 product : hypothetical protein LOC28081 protein_id : NP_613064.1

name	D11Wsu47e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982246 GeneID:276852 MGI:106356
definition	codon_start : 1 product : hypothetical protein LOC276852 protein_id : NP_808445.2

name	D11Ertd636e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21536232 CCDS:CCDS25602.1 GeneID:52670 MGI:1277182
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC52670 isoform 2 protein_id : NP_084070.1

name	D11Ertd636e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21536224 CCDS:CCDS25603.1 GeneID:52670 MGI:1277182
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC52670 isoform 1 protein_id : NP_080958.1

name	Cdc42ep4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910142 CCDS:CCDS25604.1 GeneID:56699 MGI:1929760
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008360 - regulation of cell shape [Evidence IEA]; GO:0007266 - Rho protein signal transduction [Evidence IDA] codon_start : 1 note : binder of Rho GTPase 4 product : CDC42 effector protein (Rho GTPase binding) 4 protein_id : NP_064390.1

name	Sdk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254254 CCDS:CCDS25605.1 GeneID:237979 MGI:2443847
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 product : sidekick 2 protein_id : NP_766388.2

name	LOC100041739 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262505 GeneID:100041739
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476980.1

name	LOC100041589 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041589
definition	number : 3 pseudo : _no_value

name	LOC100041589 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041589
definition	number : 4 pseudo : _no_value

clone name	MSMg01-478N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367H23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-112N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505A18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-478A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144C16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-166H08.T7 (MSMg01no166_h08.b1)	MSMg01-166H08.TJ (MSMg01no166_h08.g1)
ACC	AG364277	AG364278
length	785	858
length of high quality (start - end)	297 (45 - 341)	43 (75 - 117)
definition	CHROMAT_FILE: MSMg01no166_h08.b1 PHD_FILE: MSMg01no166_h08.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:34:58 2005	CHROMAT_FILE: MSMg01no166_h08.g1 PHD_FILE: MSMg01no166_h08.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:34:58 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCG GAATTCACAGACCAGGCCCTTCCTGGTTGCAAGTCAGTGAAACCCCAACT AACCTCACGTGATCTTAGGACTGAGTTTCCAGCAAGGGCTGGGCACTAGG GGACAAAAAAAGAGTGGAGCCTTTATCAGTCTTGCTCAGACCGAAGGCCA GATCAGGACTGCTGCCCACGGCAGGGGTTGGGGGGCCGGACTAGGAACTT CAGGTGTGTATGGGGAGAAAACACTTTGTGTTTTAAAGAATAGACTTTTT GATTCTGAATGGAACATCAAGGGGAATGTGAAGGCTATGGCAGGGGCGGA AAAGTCTTCTCTTTTTTTTCCCTTATTTTGTTTTTTTCCCCACCCTTTTA TACCCCCAATTTTTTTTCTCACCCCCCCCATTTTTTCCACCATTTTTTCC TTACCCTTTTCTCCCCCTCCTCTTTTTTTTTCCCCCCCCTTTTTTTCCTT TTTCCTTTTTTTCCCCCCCCTCCCTTTTTTTCAACCATTCCTACCCTTTC TCCCTTTTTCCCCCTCCTTTATCTCTCTCCCCCCTTATTTTTCTTACTCA CTTTTCCCCCTTTCCCTTTTTCCCTACCCCCTTTTTCTTCCCCTTTTTTC CCCCTTTCTCCACCCCCCCCCCCTTTTATTCTCCCCCCTTTCCCCTTTCT TTTTTCCCTCTTTTCTTTTTTCCCCCTTTCTTCCCCTCCCCCTCTTTCCC TCCCCCCCCTTTTTCTTCCCCTCCTTTTTCCCCCG	CGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXTGCCTTAAGAGTTAATTCTTTGGAGC TCGGGGGGGGGGGAGGTGTCAGCGCTTTTCTCTTTTTTTCTTATTTTTTT TCTTTTCTTTTTTACTTCCTTTCCCTCTTTTCTTTCCTTTTTTCTTCCTT TTCGTCGTGTTTCCTCCATCCTCCCCCCCGTTCTTTTTGGCGCCCCGGCG GGTCTGGTGGATTCAGGCTCAAGTGTAGGGGTGTTTATTCCCTCCTGCCC ACCAGGGGTCCACCAGCCTACTCCTTGTTTTTCGCACCTTTTTCCGTGCT TGTTTTATTTAAGCTTTCCTACCATCTTTATCCACCGCCAATGGCCAATG ATTCTTTTATTAGTTCGAATATATGGGCCCCACCGCGGTGGGGAATATGT CTTAGAGGGTGATGGTTTGTCTTCTCTTTTTTGCCATACGCGCAACATTT TAATTGAGCGTGGATTTATCATGCTCTTCGTGTATTGGTTTCGCATTTAG CATGTGGCGGGACAGGTCGGTCGTGGTCCTGGCGTTGTCGTGCCTTTGTG TGTTTCGCGGTTTGGCGTTTCGACATCTGTATGTGTGTTTGAGGCGGTTC TGTTGCGCGTCCTTACCTCGCCGCTCTGTGTGGGAATCGTGTGTATATTT TGGTATATGGTGAGGCGATATAATTGGTTTGTCTCGCGTGTCCGCGCTTT TGGTTTAACACGACGAGATCTGACACTGAGTAGGGCCTCATGTCCCTTTG TGTGTAGTCATTGCCACAGAGATGAAGAGGGTGCGCCGTGCCTAATAATC TTCATTAG
quality values	Open. Hide. 16 16 16 16 19 16 26 26 33 37 37 39 39 39 34 34 41 41 33 33 33 37 33 33 46 48 28 28 28 25 19 22 15 14 18 20 20 14 12 12 12 10 12 15 16 20 24 32 34 37 36 36 35 35 36 33 37 33 33 33 25 19 11 12 12 11 12 14 14 19 34 34 47 47 59 47 59 37 47 39 39 39 47 48 48 48 48 48 48 48 48 48 48 48 48 43 39 39 39 46 46 54 54 41 41 41 41 43 47 54 54 54 54 54 48 57 48 50 48 57 57 57 57 44 43 43 43 44 57 57 57 57 48 44 44 43 43 43 57 57 43 43 43 43 43 57 57 57 43 43 32 41 32 32 32 42 44 48 57 50 57 57 57 57 52 52 52 57 57 57 68 68 68 68 57 57 57 57 59 57 59 59 59 57 57 57 57 54 52 52 52 52 57 52 52 52 43 43 29 32 32 43 44 52 48 48 48 50 57 54 54 54 59 59 59 47 44 44 42 42 33 35 35 42 42 42 42 42 37 42 41 43 43 54 48 57 54 54 54 57 57 57 48 48 48 48 48 57 48 48 35 35 32 37 41 41 41 32 32 39 37 34 26 26 30 34 47 48 48 48 48 42 48 48 57 43 59 39 35 35 39 47 47 48 48 57 48 57 34 34 30 28 25 28 34 37 21 19 8 6 6 8 19 27 41 37 37 30 28 28 37 31 39 39 39 37 39 34 34 22 19 17 12 11 11 12 12 24 21 28 28 30 30 32 33 28 28 18 18 13 13 13 28 16 16 11 11 11 16 18 21 10 10 6 7 6 6 8 6 6 8 10 14 18 16 13 16 10 10 12 26 19 16 11 9 9 8 8 6 6 8 8 9 10 10 9 9 9 8 8 8 8 8 8 13 13 18 11 10 8 8 8 8 8 12 19 10 10 10 10 12 10 10 12 10 8 8 6 6 6 6 7 16 16 12 8 8 9 10 10 10 15 21 21 17 11 10 10 10 10 10 10 10 10 15 24 17 12 12 11 10 10 10 10 10 10 10 9 9 9 9 9 10 12 12 9 9 9 9 9 10 23 16 9 12 13 16 24 13 12 19 16 18 14 19 18 12 10 8 8 8 12 14 16 13 10 8 8 8 8 15 26 22 15 10 9 9 12 14 12 9 9 10 10 15 24 20 17 14 9 9 10 9 11 17 22 19 17 15 8 6 6 8 6 8 8 8 8 8 8 8 8 8 8 13 13 11 11 10 10 10 9 9 8 10 8 8 9 9 11 15 15 19 15 16 16 14 10 10 9 6 6 10 8 8 8 6 6 10 9 18 15 12 11 13 9 10 10 10 11 23 12 12 9 6 6 6 8 8 8 8 8 14 18 13 12 15 19 15 10 10 8 8 10 16 24 26 12 9 9 9 6 7 6 6 6 6 11 12 12 14 14 18 13 15 10 8 8 8 8 13 26 27 25 25 27 27 22 25 30 23 21 11 9 9 8 8 8 8 10 8 9 10 13 16 21 17 15 15 14 24 15 17 17 17 17 11 10 6 10 6 6 6 15 15 10 10 10 9 14 16 12 14 12 13 14 20 28 37 37 43 28 28 13 13 11 18 12 14 18 14 11 10 8 8 8 12 11 15 10 10 13 19 9 11 12 13 13 10 11 11 12 12 10 9 13 10 11 10 18 25 13 10 10 10 13 10 8 8 6 8 13 19 17 25 20 18 18 13 16 18 17 18 10 10 10 12 12 11 18 8 8 8 10 10 10 8 8 8 9 15 8 8 8 8	Open. Hide. 6 6 8 8 8 6 6 8 8 9 11 12 14 22 22 37 33 33 50 50 53 50 50 50 50 47 47 39 25 17 11 9 9 6 6 6 7 6 6 8 10 10 28 23 32 34 34 44 41 47 47 53 44 50 50 50 47 43 43 22 23 9 8 8 6 6 6 6 17 19 29 30 31 31 42 50 50 50 59 59 57 57 53 53 53 53 57 53 53 50 50 50 57 57 57 57 68 57 57 59 59 59 59 59 59 59 59 59 59 59 57 50 50 36 36 17 21 11 11 10 13 15 9 8 8 8 8 8 8 8 9 9 9 10 9 9 7 7 7 8 8 8 8 10 11 10 9 10 8 8 8 8 8 8 11 11 11 11 11 10 10 11 10 10 10 10 8 8 6 6 6 6 8 8 6 6 6 6 8 6 10 10 10 10 10 10 10 10 10 11 8 11 8 8 8 8 11 12 12 15 13 13 10 9 9 10 8 10 7 7 8 8 8 9 8 8 10 8 10 9 10 13 10 9 10 8 8 8 8 10 10 10 10 10 10 11 11 11 8 8 6 6 8 8 8 8 8 8 6 6 8 8 8 8 8 10 9 9 11 10 8 8 10 7 7 8 6 8 8 8 8 8 8 8 9 9 8 8 12 10 10 8 8 8 10 6 6 8 8 11 10 10 11 8 10 6 6 8 8 8 8 8 8 6 6 8 8 9 10 10 10 8 8 8 8 8 8 8 8 8 8 10 10 12 9 9 9 7 14 14 13 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 8 10 15 16 16 12 10 8 8 8 8 8 10 9 8 8 8 8 8 8 8 8 8 8 8 8 9 13 15 11 11 11 11 11 9 9 9 8 8 8 12 8 8 9 9 8 8 8 8 10 10 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 10 11 21 12 12 9 9 6 6 6 6 7 6 6 6 6 6 9 9 10 9 9 8 8 8 8 8 8 8 9 9 9 8 8 8 6 6 8 10 8 8 10 10 8 10 8 8 8 8 10 10 13 13 13 10 10 7 7 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 8 8 6 6 8 10 10 8 8 8 8 8 8 8 6 6 8 8 10 8 8 6 6 6 6 8 10 8 8 11 11 9 8 8 8 8 8 8 8 9 9 11 8 8 8 8 8 8 10 13 10 10 8 8 6 6 10 10 10 8 6 8 6 6 6 8 6 8 8 10 9 9 12 12 15 15 10 12 12 11 12 12 10 9 9 10 10 10 9 9 9 12 13 15 11 11 9 6 7 6 7 10 11 10 8 13 10 11 11 8 8 6 6 8 8 9 9 9 9 10 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 6 6 6 8 8 8 8 9 9 9 9 9 9 9 9 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 6 6 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 8 8 11 11 11 11 6 6 6 7 8 8 12 15 15 11 15 11 11 10 8 8 8 8 8 7 6 6 6 8 8 8 10 10 11 8 8 8 8 8 8 8 8 8 8 10 10 10 9 10 8 8 8 6 8 8 8 8 8 8 8 9 9 16 12 10 10 10 8 8 8 8 8 8 6 6 8 8 9 8 8 6 6 8 8 6 6 6 6 6 6 8 6 8 8 8 8 8 8 10 10 10 10 9 10 8 7 8 8 10 8 8 10 8 9 10 10 8 8 8 8 8 8 7 6 8 8 6 6 8 8 8 8 8 9 9 8 8 6 6 8 8 10 10 8 8 8 8 8 8 8 8 8 10 12 10 10 10 8 8 8 8 8 8 8 8 8 8 8 9 10 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no166_h08.b1 MSMg01no166_h08.b1 CHROMAT_FILE:
MSMg01no166_h08.b1 PHD_FILE: MSMg01no166_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:58 2005
         (297 letters)



>mm_chr11_112948461_112949157
          Length = 697

 Score =  501 bits (259), Expect = e-146
 Identities = 283/291 (97%), Gaps = 2/291 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcacagaccaggcccttcctggttgcaagtcagtgaaaccccaactaacctcacgt 66
           ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcacagaccaggggtttcctggttgcaagtcagtgaaaccccaactaacctcacgt 266

                                                                       
Query: 67  gatcttaggactgagtttccagcaagggctgggcactaggggacaaaaaaagagtggagc 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gatcttaggactgagtttccagcaagggctgggcactaggggacaaaaaaagagtggagc 326

                                                                       
Query: 127 ctttatcagtcttgctcagaccgaaggccagatcaggactgctgcccacggcaggggttg 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 327 ctttatcagtcttgctcagaccgaaggccagatcaggactgctgcccacggcaggggctg 386

                                                                       
Query: 187 gggggccggactaggaacttcaggtgtgtatggggagaaaacactttgtgttttaaagaa 246
           ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 387 gggggccggactaggaacttcagctgtgtatggggagaaaatactttgtgttttaaagaa 446

                                                              
Query: 247 tagactttttg-attctgaatggaacatcaaggggaatgtgaaggctatgg 296
           ||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tagactttt-gtattctgaatggaacatcaaggggaatgtgaaggctatgg 496


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space:   198144
Effective search space used:   198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information