Query= MSMg01no168_g02.b1 MSMg01no168_g02.b1 CHROMAT_FILE:
MSMg01no168_g02.b1 PHD_FILE: MSMg01no168_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:33 2005
(349 letters)
>mm_chr11_67619221_67619969
Length = 749
Score = 636 bits (329), Expect = 0.0
Identities = 341/345 (98%)
Strand = Plus / Plus
Query: 5 gaattctcatcatttttatcgatagttcttacttatgctggaactattaacattttgctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcatcatttttatcgatagttcttacttatgctggaactattaacattttgctt 264
Query: 65 tagctttggcagtttaatattctattttagtaactaacatttttcaagatagttgtctta 124
||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 265 tagctttggcagttttatattttattttagtaactgacatttttcaagatagttgtctta 324
Query: 125 gatagggcttttattgttatgaagagacaccacgaccaaggcaactcttataaaggcaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatagggcttttattgttatgaagagacaccacgaccaaggcaactcttataaaggcaga 384
Query: 185 catttaattggggctggcttgcagtttcagaggttcagttcattatcatcatagcaggaa 244
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catttaattggggctggcttacagtttcagaggttcagttcattatcatcatagcaggaa 444
Query: 245 gcatgcagcatgcaggccaacatggtactggacaaggagatgagagttctgcatcttgat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcatgcagcatgcaggccaacatggtactggacaaggagatgagagttctgcatcttgat 504
Query: 305 tcaaaggcaaccaggagagactggcttccagggagctaggaggag 349
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcaaaggcaaccaggagagactggcttccagggagctaggaggag 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_g02.g1 MSMg01no168_g02.g1 CHROMAT_FILE:
MSMg01no168_g02.g1 PHD_FILE: MSMg01no168_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:33 2005
(278 letters)
>mm_chr11_67728481_67729158
Length = 678
Score = 501 bits (259), Expect = e-146
Identities = 271/277 (97%), Gaps = 6/277 (2%)
Strand = Plus / Minus
Query: 5 caatgaactgaaggggacagaacttgtataggaggcctatac---aaggggctggtgtag 61
||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||
Sbjct: 349 caatgaactgaaggggacagaacttgtataggagg--t-tacacaaaggggctggtgtag 293
Query: 62 tccatagaagccagaaagtatgtttggggcaccagagtggattttttttacctggagctt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tccatagaagccagaaagtatgtttggggcaccagagtggattttttttacctggagctt 233
Query: 122 tgaaacagagaggaagtagatgagatggtgtaatcctggtgctagggaggtggggacagg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tgaaacagagaggaagtagatgagatggtgtaatcctggtgctagggaggtggggacagg 173
Query: 182 aggctcagaagttcaaggccatccttgactacatagtgagcgggaggtttaggctacagg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 aggctcagaagttcaaggccatccttgactacatagtgagcgggaggtttaggctacagg 113
Query: 242 gctgaaggaggtcttggtgggggtgaggaaggaggtg 278
|||||||||||||||||||||||||||||||||||||
Sbjct: 112 gctgaaggaggtcttggtgggggtgaggaaggaggtg 76
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
