Query= MSMg01no173_a20.b1 MSMg01no173_a20.b1 CHROMAT_FILE:
MSMg01no173_a20.b1 PHD_FILE: MSMg01no173_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:39 2005
(321 letters)
>mm_chr11_25540968_25541687
Length = 720
Score = 524 bits (271), Expect = e-153
Identities = 304/315 (96%), Gaps = 1/315 (0%)
Strand = Plus / Plus
Query: 5 gaattctgcttcattaccaactggaagtgattagacaaaggttggtttctctcaggagtt 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgcttcaagagaaactggaagtgattagacaaaggttggtttctctcaggagtt 264
Query: 65 ccgagtctcttctgcacgcaaaaacaatctccttattttattcttccctccagttgaata 124
|| ||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cccagtctcttctg-aggtaaaaacaatctccttattttattcttccctccagttgaata 323
Query: 125 tttaagaaagagctgccactttaaagtcctgggtattttaacaactatttaagtagcaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 324 tttaagaaagagctgccactttaaagtcctgggtattttaacaactatttaagtagctca 383
Query: 185 tttgagattcttctctttcaattcctatatgtaatttccctctcactgttcttttcctac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttgagattcttctctttcaattcctatatgtaatttccctctcactgttcttttcctac 443
Query: 245 ctagaatcactgggcaaggagagattctcttggaccatagccacactcctgatccatcag 304
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 444 ctagaatcactggacaaggagagattctcttggaccagagccacactcctgatccatcag 503
Query: 305 tgggtttcctctcct 319
|||||||||||||||
Sbjct: 504 tgggtttcctctcct 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 720
Length adjustment: 9
Effective length of query: 312
Effective length of database: 711
Effective search space: 221832
Effective search space used: 221832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_a20.g1 MSMg01no173_a20.g1 CHROMAT_FILE:
MSMg01no173_a20.g1 PHD_FILE: MSMg01no173_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:39 2005
(247 letters)
>mm_chr11_25672463_25673109
Length = 647
Score = 478 bits (247), Expect = e-139
Identities = 247/247 (100%)
Strand = Plus / Minus
Query: 1 atcattatctacaatatcaccagtgacgcatctgaatgatgagttcagtattcctgcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atcattatctacaatatcaccagtgacgcatctgaatgatgagttcagtattcctgcaaa 388
Query: 61 gttaagatcatgggtctggtaattaggttgatatatatttatttaaaggttgtttttctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gttaagatcatgggtctggtaattaggttgatatatatttatttaaaggttgtttttctg 328
Query: 121 ctctggaggcgtaagagttaagggttttagagaagatggattctgtattactgtgtgagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctctggaggcgtaagagttaagggttttagagaagatggattctgtattactgtgtgagt 268
Query: 181 tggggctaatcatggccaccattgagttctggattctattttaaagggagtaacaaacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tggggctaatcatggccaccattgagttctggattctattttaaagggagtaacaaacca 208
Query: 241 attatgg 247
|||||||
Sbjct: 207 attatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
