Query= MSMg01no177_n09.b1 MSMg01no177_n09.b1 CHROMAT_FILE:
MSMg01no177_n09.b1 PHD_FILE: MSMg01no177_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:28 2005
(592 letters)
>mm_chr11_106731585_106732576
Length = 992
Score = 1038 bits (537), Expect = 0.0
Identities = 573/591 (96%), Gaps = 12/591 (2%)
Strand = Plus / Plus
Query: 5 gaattcttttaaacccgtaagctaaacactttttgttggtggtggtgtttttaagaaaga 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttttaaacctgtaagctaaacactttttgttggtggtggtgtttttaagaaaga 264
Query: 65 gtcttgctatgttgtccattcaggggctgagaacgtaacaactctcctgaataggcagca 124
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 265 gtcttgctatgttgtccattcaggggctgagaacgtaacaaccctcctgaataggcagca 324
Query: 125 ctataggcaccactgcactctgttttaaacttaaatagaaatctctattttatagaacct 184
||||||||||||||||||||| |||| ||||||||||||||||| |||||||
Sbjct: 325 ctataggcaccactgcactct-------acttt--tagaaatctctattttagagaacct 375
Query: 185 caacttc---aacaagtacaaaatttaaaaacaaaatttaagagggtctaacataaggaa 241
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 caacttctccaacaagtacaaaatttaaaaacaaaatttaagagggtctaacataaggaa 435
Query: 242 tatctccataagggaacataatattatcatgtagaatacagtattatatatgcagtcaag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tatctccataagggaacataatattatcatgtagaatacagtattatatatgcagtcaag 495
Query: 302 attttggctaaagtataattgttatcctttctaggcctacccaatgtaacgaaaagattt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 attttggctaaagtataattgttatcctttctaggcctacccaatgtaacgaaaagattt 555
Query: 362 aacaaaatgacctcaactgttactctgatcttgtcccctccacatctaagatagacctcc 421
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aacaaaatgatctcaactgttactctgatcttgtcccctccacatctaagatagacctcc 615
Query: 422 ctaggtagccagttaatactaactaaaaaataagttccatcgagcacatgaaaagatgtc 481
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 616 ctaggtagccagttaatactaactaaaaaataagtttcatcgagcacatgaaaagatgtc 675
Query: 482 caacatcactagtcttcaagaaaaggtaaattgaatctatcaagaaatatggctgtaact 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 caacatcactagtcttcaagaaaaggtaaattgaatctatcaagaaatatggctgtaact 735
Query: 542 ttttcaaaatatgttttccttcttttaactctgtgtgtgtgtgtgtgtgtg 592
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ttttcaaaatatgttttccttcttttaactctgtgtgtgtgtgtgtgtgtg 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no177_n09.g1 MSMg01no177_n09.g1 CHROMAT_FILE:
MSMg01no177_n09.g1 PHD_FILE: MSMg01no177_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:29 2005
(141 letters)
>mm_chr11_106889238_106889778
Length = 541
Score = 255 bits (132), Expect = 6e-73
Identities = 138/140 (98%)
Strand = Plus / Minus
Query: 1 tcgctggcgcaataggcctcccactcgtccgcgtccgcgctgcaggcgcgcgcgcaggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tcgctggcgcaataggcctcccactcgtccgcgtccgcgctgcaggcgcgcgcgcaggac 281
Query: 61 tgagtctctggctccctgtcctccggcgacagcgcctgcggggtccaagagggctgcgct 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 280 tgagtctctggctccctgtcctccggcgacagcgcctgcggggtcccagagggctgcgct 221
Query: 121 gctgcacgcggccggttcgg 140
||||| ||||||||||||||
Sbjct: 220 gctgcgcgcggccggttcgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 541
Length adjustment: 8
Effective length of query: 133
Effective length of database: 533
Effective search space: 70889
Effective search space used: 70889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
