Query= MSMg01no179_m08.b1 MSMg01no179_m08.b1 CHROMAT_FILE:
MSMg01no179_m08.b1 PHD_FILE: MSMg01no179_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:52 2005
(233 letters)
>mm_chr11_118126234_118126866
Length = 633
Score = 429 bits (222), Expect = e-125
Identities = 228/230 (99%)
Strand = Plus / Minus
Query: 1 tttacggagctagttcaaagacagccagggctgcacaaaccttgtctcaaaccccacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttacggagctagttcaaagacagccagggctgcacaaaccttgtctcaaaccccacatc 422
Query: 61 tgcaccaaactcttaggtgtgaaggcggctgggtggggccaggagagaggtggcatgtgg 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 421 tgcaccaaactcttaggtgtgaaggcggctgggtggggtcaggagagaggtggcacgtgg 362
Query: 121 gcagatctcctgagtgactctctctgtccaccgtctacaggactgctgcacctgcccccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcagatctcctgagtgactctctctgtccaccgtctacaggactgctgcacctgcccccc 302
Query: 181 gaccgtccacccacccccactctgcatctctgtccagtagtagtgccaag 230
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaccgtccacccacccccactctgcatctctgtccagtagtagtgccaag 252
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no179_m08.g1 MSMg01no179_m08.g1 CHROMAT_FILE:
MSMg01no179_m08.g1 PHD_FILE: MSMg01no179_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:52 2005
(269 letters)
>mm_chr11_117985233_117985900
Length = 668
Score = 489 bits (253), Expect = e-143
Identities = 265/269 (98%), Gaps = 1/269 (0%)
Strand = Plus / Plus
Query: 1 ccacggcacgggcggcctgtccttttagaagggagaggaagagaggagggtgagtggcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccacggcacgggcggcctgtccttttagaagggagaggaagagaggagggtgagtggcta 260
Query: 61 gaggcggccacggttgctgagaggcccaggctccacgagcccacaggtaccttaaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggcggccacggttgctgagaggcccaggctccacgagcccacaggtaccttaaagaaa 320
Query: 121 agcttcatgttggcacagcagaagtcgtaggcttgtaagagccccttgaggacgctcacc 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 agcttcatgttggcacagcagaagtcgtaggcttggaagagccccttgaggacgctcacc 380
Query: 181 gacaggtagatgttgcccaggacctcctcgatctccccctgcaggcccttcagcacctcg 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacagggagatgttgcccaggacctcctcgatctccccctgcaggcccttcagcacctcg 440
Query: 241 tccgggctcattgtaggttctagtctaca 269
|||||||||| |||||||||||||||||
Sbjct: 441 tccgggctcag-gtaggttctagtctaca 468
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 668
Length adjustment: 9
Effective length of query: 260
Effective length of database: 659
Effective search space: 171340
Effective search space used: 171340
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
