Query= MSMg01no180_e03.b1 MSMg01no180_e03.b1 CHROMAT_FILE:
MSMg01no180_e03.b1 PHD_FILE: MSMg01no180_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:27 2005
(646 letters)
>mm_chr11_9488901_9489945
Length = 1045
Score = 1118 bits (578), Expect = 0.0
Identities = 600/608 (98%), Gaps = 4/608 (0%)
Strand = Plus / Minus
Query: 1 caatgcagttgaggccaagtacccagccagacaaaggcatagtatgaaaaaagagccgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 605 caatgcagttgaggccaagtacccagccagacaaaggcatagtatgaaaaaagagatgct 546
Query: 61 aatgactaaacatcaaaggtattttggttgagaaaaaaatttgagacactatccagatgg 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 545 aatgactaaacatcaaaggtatttt-gttgagaaaaaaatttgagacactatccagatgg 487
Query: 121 aaattaaatcaaattatacttcggctatacaaaagattctaatataaactccttataaat 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aaattaaatcaaattatactttggctatacaaaagattctaatataaactccttataaat 427
Query: 181 taagcacattaaaataatgaatctttggaaagactttatgacttcaaaaaagaaactaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 taagcacattaaaataatgaatctttggaaagactttatgacttcaaaaaagaaactaat 367
Query: 241 cagggatcaaaaagtcacaaataaaatagggggacaaaaactgactccattatagctgcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cagggatcaaaaagtcacaaataaaatagggggacaaaaactgactccattatagctgcg 307
Query: 301 aatttatattgcatacaattataaatatgaggaactgaaagagaatactgaaaacaaaat 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aatttctattgcatacaattataaatatgaggaactgaaagagaatactgaaaacaaaat 247
Query: 361 ctagacaacgttcattacaggaacatatactaagaatttctatttcagttgggaagtaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ctagacaacgttcattacaggaacatatactaagaatttctatttcagttgggaagtaat 187
Query: 421 agtgtacacctttactcccagtacttgggaggcagaggcaggcagatctctgagttcaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 agtgtacacctttactcccagtacttgggaggcagaggcaggcagatctctgagttcaat 127
Query: 481 gccagcctac-acagagaaactctgtctcaaaaaaagaatcaataacaacaacaaagagt 539
|||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gccagcctacaacagagaaa--ctgtctcaaaaaaagaatcaataacaacaacaaagagt 69
Query: 540 ttctatttcaatgaatagccaaaattaataacattatttacaatagaacaaagatctgtt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ttctatttcaatgaatagccaaaattaataacattatttacaatagaacaaagatctgtt 9
Query: 600 aggaatag 607
||||||||
Sbjct: 8 aggaatag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1045
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1035
Effective search space: 658260
Effective search space used: 658260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no180_e03.g1 MSMg01no180_e03.g1 CHROMAT_FILE:
MSMg01no180_e03.g1 PHD_FILE: MSMg01no180_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:27 2005
(641 letters)
>mm_chr11_9418242_9419283
Length = 1042
Score = 1195 bits (618), Expect = 0.0
Identities = 636/642 (99%), Gaps = 1/642 (0%)
Strand = Plus / Plus
Query: 1 tttgtctggggttttcttgaattcattctcattggacaacactactatgcgatcaataat 60
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tttgtctggagttttcttgaattcattctcattggacaacactactatgggatcaataat 260
Query: 61 gtttttaggagtattaatactttgaattttcttgtaattaggttttcctttgcatgtacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttttaggagtattaatactttgaattttcttgtaattaggttttcctttgcatgtacc 320
Query: 121 cattgagaaaaattgtttgtgagatttaaaaagatcaaccttattatttgagtggacata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattgagaaaaattgtttgtgagatttaaaaagatcaaccttattatttgagtggacata 380
Query: 181 ttttcagtgttcctgaagggctgggtctacctgacataatgcttctcgtcttgctaagga 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttcagtgttcctgaaggactgggtctacctgacataatgcttctcgtcttgctaagga 440
Query: 241 tatacttcaattattaaatcctcagcccatgtgcttgttgcaccagtacccagtactccc 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatacttcaattattaaatccttagcccatgtgcttgttgcaccagtacccagtactccc 500
Query: 301 ctttgtgaaaatacaatataaggcaattaaagagaaattgttctttcaactgaatcattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttgtgaaaatacaatataaggcaattaaagagaaattgttctttcaactgaatcattt 560
Query: 361 taagaaaagaagtaacactcataatagtgtattcactacatattagagtgcagggagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taagaaaagaagtaacactcataatagtgtattcactacatattagagtgcagggagaaa 620
Query: 421 agctgagtaagactaatgattagtatggagtgatagaaagatacaccagggaagctacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agctgagtaagactaatgattagtatggagtgatagaaagatacaccagggaagctacaa 680
Query: 481 gaaggacaattaggggaaatgagacatctcaggaggatggaaacatgagaagagaaagat 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 681 gaaggacaattaggggaaatgagacatctcaggaggatggtaacatgagaagagaaagat 740
Query: 541 gtaaagaatggcagtcagaggttggccaagcaacctcaacatcccaaactcataaatttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtaaagaatggcagtcagaggttggccaagcaacctcaacatcccaaactcataaatttg 800
Query: 601 aggtacagagactccttccctcca-ccagagaaactttatct 641
|||||||||||||||||||||||| |||||||||||||||||
Sbjct: 801 aggtacagagactccttccctccaaccagagaaactttatct 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1042
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1032
Effective search space: 651192
Effective search space used: 651192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
