Query= MSMg01no185_p21.b1 MSMg01no185_p21.b1 CHROMAT_FILE:
MSMg01no185_p21.b1 PHD_FILE: MSMg01no185_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:50 2005
(240 letters)
>mm_chr11_87411027_87411666
Length = 640
Score = 447 bits (231), Expect = e-130
Identities = 234/235 (99%)
Strand = Plus / Plus
Query: 1 catcaacgtaagtcctcgtcttgttttcttcacaccagactcagagtccccatctgcttc 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catcaacgtaagttctcgtcttgttttcttcacaccagactcagagtccccatctgcttc 260
Query: 61 aaggtggcgttgttccagtgccttaccaaagtatgtcttcccaaagagatgggatttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggtggcgttgttccagtgccttaccaaagtatgtcttcccaaagagatgggatttcct 320
Query: 121 tcccattggccttgctacttcttagctcatttctctatgtacaggtttatctgtctctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcccattggccttgctacttcttagctcatttctctatgtacaggtttatctgtctctct 380
Query: 181 gtgtaccctggctgtcctggaactccccctgtagaccaggctggcctcgaactca 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtaccctggctgtcctggaactccccctgtagaccaggctggcctcgaactca 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no185_p21.g1 MSMg01no185_p21.g1 CHROMAT_FILE:
MSMg01no185_p21.g1 PHD_FILE: MSMg01no185_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:50 2005
(291 letters)
>mm_chr11_87534100_87534790
Length = 691
Score = 526 bits (272), Expect = e-154
Identities = 288/296 (97%), Gaps = 6/296 (2%)
Strand = Plus / Minus
Query: 1 tctgtccgctcccagcttgctacgccctgagcccgtgcttcctgaacaaacatttctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tctgtccgctcccagcttgctacgccctgagcccgtgcttcctgaacaaacatttctcca 294
Query: 61 gattttgtaaagcaggagagactaaatacccataagtagggaggctccagtcagaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gattttgtaaagcaggagagactaaatacccataagtagggaggctccagtcagaagaaa 234
Query: 121 atctgcagttgtaaaggactgtggcccgtggcctatggtgctgtaaatgagaaaggcttt 180
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 233 atctgcagctgtaaaggactgtggcccgtggcctatggtgctgtgaatgagaaaggcttt 174
Query: 181 ccgtgggctcaggcgct-----cgcacacgggggtccccagttggcagaactacggagga 235
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ccgtgggctcaggcgctcgcaccgcacacgggggtccccagttggcagaactacggagga 114
Query: 236 gagccagagggccagcctgggctacagagtgagactctttctcaaaatccaaaata 291
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 gagccaga-ggccagcctgggctacagagtgagactctttctcaaaatccaaaata 59
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
