Query= MSMg01no192_p05.b1 MSMg01no192_p05.b1 CHROMAT_FILE:
MSMg01no192_p05.b1 PHD_FILE: MSMg01no192_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:03 2005
(211 letters)
>mm_chr11_62926041_62926650
Length = 610
Score = 360 bits (186), Expect = e-104
Identities = 198/203 (97%), Gaps = 3/203 (1%)
Strand = Plus / Plus
Query: 10 gaattc-ctaattatacacataagattggaccagggacagacatcaagtcccaatcctta 68
|||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gaattcactaattatacac--aagattggaccagggacagacatcaagtcccaatcctta 267
Query: 69 tctatggcagagatggattgggggaaggaggtggtgtagagtcncttgatgtccatctac 128
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 268 tctatggcagagatggattgggggaaggaggtggtgtagagtcacttgatgtccatctac 327
Query: 129 aggaagttcctctcacatattctcatctaagccactctgctgaaacccagtgcggcatgt 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aggaagttcctctcacatattctcatctaagccactctgctgaaacccagtgcggcatgt 387
Query: 189 gaccctaccacatgaaaggagga 211
||||||||||||| |||||||||
Sbjct: 388 gaccctaccacataaaaggagga 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 610
Length adjustment: 9
Effective length of query: 202
Effective length of database: 601
Effective search space: 121402
Effective search space used: 121402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no192_p05.g1 MSMg01no192_p05.g1 CHROMAT_FILE:
MSMg01no192_p05.g1 PHD_FILE: MSMg01no192_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:03 2005
(379 letters)
>mm_chr11_63024608_63025380
Length = 773
Score = 609 bits (315), Expect = e-179
Identities = 361/379 (95%), Gaps = 8/379 (2%)
Strand = Plus / Minus
Query: 1 ttcagaagaagcagcctcataaaacctcagatagcaatcacagacgatttacaaaaggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttcagaagaagcagcctcataaaacctcagatagcaatcacagacgatttacaaaaggct 482
Query: 61 atttcaaagcctaggtaccttcaccccagaattcatgccagatacaatggctctgccaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atttcaaagcctaggtaccttcaccccagaattcatgccagatacaatggctctgccaaa 422
Query: 121 gtctgctatgagcatgcatgcgcacctcccccacccacacacacatatgtgtgtgagtgc 180
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atctgctatgagcatgcgtgcgcacctcccccacccacacacacatatgtgtgtgagtgc 362
Query: 181 atgcatgtgtacatgcatgtttccaaatatcccccaaagacacatacacataccaacaga 240
||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 361 gtgcatgtgtacatgcatgtttccaaatatcccccaaagacacata-----a-caacagg 308
Query: 241 catgtacacatgtattccctccttgtattcattccatgaacaaaacatccattaggtcta 300
|||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 307 catgcacacatgtattccctccttgtactcattccatgaacaaaacatccattaagtcta 248
Query: 301 ttatgagccagt-ttcttggcttgatatctggtgcatggtaggacatctcacacacacat 359
|||||||||||| || |||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 247 ttatgagccagtgtt-ttggcttgatatctggggcatggtaggacatcacacacacacac 189
Query: 360 acacacacacacacacaca 378
|||||||||||||||||||
Sbjct: 188 acacacacacacacacaca 170
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 773
Length adjustment: 9
Effective length of query: 370
Effective length of database: 764
Effective search space: 282680
Effective search space used: 282680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
