Query= MSMg01no194_b04.b1 MSMg01no194_b04.b1 CHROMAT_FILE:
MSMg01no194_b04.b1 PHD_FILE: MSMg01no194_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:51 2005
(525 letters)
>mm_chr11_88041441_88042365
Length = 925
Score = 973 bits (503), Expect = 0.0
Identities = 518/523 (99%), Gaps = 2/523 (0%)
Strand = Plus / Minus
Query: 4 ggaattcattttgtaagctattcatctttgcagtgatgcctgccacttccagtctcctca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 ggaattcattttgtaagctattcatctttgcagtgatgcctgccacttccagtctcctca 666
Query: 64 cctcatccccactgtccagaggggccagaatagtgtatcttttgatgctgtaaaaacaca 123
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 665 cctcatccccactgtccagaggggccagaatagtgtatc-tttgatgctgtaaaaacaca 607
Query: 124 gtttctatagctcagatgccttcctttagcttaatttccataacataaaatctatcagga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gtttctatagctcagatgccttcctttagcttaatttccataacataaaatctatcagga 547
Query: 184 aatgatcaccggttcaggccatctcagtgtaagtaagtggcagcttgacagaaatgcttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aatgatcaccggttcaggccatctcagtgtaagtaagtggcagcttgacagaaatgcttg 487
Query: 244 agattttagcagcagtaaccaaccaatcaacaaacacacaacacatcatgacacaaatta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 agattttagcagcagtaaccaaccaatcaacaaacacacaacacatcatgacacaaatta 427
Query: 304 ccccccctttagtgtcatttggagccacagatgttcactaggtgaccacagcaggacaga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ccccccctttagtgtcatttggagccacagatgttcactaggtgaccacagcaggacaga 367
Query: 364 tgtggccttcggtcttcccccttgctgccttgacctaggtcaggcaggcttggatgagct 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 366 tgtggccttcggtcttcccccttgctgccttgacctaggtcaggcaggcttggaccagct 307
Query: 424 tagctggagctgttgctgctttgcacccctgggcagctgcagcagcccaaatgctgtagc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tagctggagctgttgctgctttgcacccctgggcagctgcagcagcccaaatgctgtagc 247
Query: 484 t-ccccccccccccccgtgcttcgaagtccttcagaggaaact 525
| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 246 tcccccccccccccccgtgctccgaagtccttcagaggaaact 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_b04.g1 MSMg01no194_b04.g1 CHROMAT_FILE:
MSMg01no194_b04.g1 PHD_FILE: MSMg01no194_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:51 2005
(296 letters)
>mm_chr11_87967755_87968450
Length = 696
Score = 572 bits (296), Expect = e-168
Identities = 296/296 (100%)
Strand = Plus / Plus
Query: 1 aggtctctaaattgcatcaccctttaagacgacagtcccatgtgaccatggatcggaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtctctaaattgcatcaccctttaagacgacagtcccatgtgaccatggatcggaatg 260
Query: 61 gctaggagttgtgaaaatgcaggttccctggacacacactcccagaggttgctatttaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctaggagttgtgaaaatgcaggttccctggacacacactcccagaggttgctatttaat 320
Query: 121 agcagcggagaatgtgtccttagcaaagccccagggacatctgatgacagtgagtgccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcagcggagaatgtgtccttagcaaagccccagggacatctgatgacagtgagtgccac 380
Query: 181 actctctgcagatgctaccagaatgtagaaagcatttgcttcccaggctgtaggaaggcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actctctgcagatgctaccagaatgtagaaagcatttgcttcccaggctgtaggaaggcg 440
Query: 241 cggatgcattcctcgaggccggagagaggggcagagccaagctctagttatttatt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cggatgcattcctcgaggccggagagaggggcagagccaagctctagttatttatt 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
