Query= MSMg01no195_e12.b1 MSMg01no195_e12.b1 CHROMAT_FILE:
MSMg01no195_e12.b1 PHD_FILE: MSMg01no195_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:27 2005
(615 letters)
>mm_chr11_64550665_64551679
Length = 1015
Score = 1143 bits (591), Expect = 0.0
Identities = 606/611 (99%)
Strand = Plus / Minus
Query: 5 gaattcatgaattcccaagggtggtaattaattgaatgcaacaagacaacaaacagtgac 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 gaattcatgaatttcaaagggtggtaattaattgaatgcaacaagacaacaaacagtgac 756
Query: 65 cttttcctcagcgtgcaacctttgcatctgcttttgggtagaatcaggggccaggctgac 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 cttttcctcagcttgcaacctttgcatctgcttttgggtagaatcaggggccaggctgac 696
Query: 125 atggtctcagtgtggatggcagggaacccctttcagcgatatatcagcccattaccagcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 atggtctcagtgtggatggcagggaacccctttcagcgatatatcagcccattaccagcc 636
Query: 185 ttggcagacattctttggctgtctcaggatgaatccgcccagctcttggcagaagagaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 635 ttggcagacattctttggctgtctcaggatgaatccgcccagctcttggcagaggagaaa 576
Query: 245 agacttcccaaatcatttctcaactgatcggtcaaagtgagttaaattattccaggtgtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 agacttcccaaatcatttctcaactgatcggtcaaagtgagttaaattattccaggtgtg 516
Query: 305 ctacgcagggggttattatgaccatagggaaatggtaacaggagggcaagtccattgccc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ctacgcagggggttattatgaccatagggaaatggtaacaggagggcaagtccattgccc 456
Query: 365 agagagctgatgaattggtttctctctcctgtctccctgtagcccctcaacagctggact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 agagagctgatgaattggtttctctctcctgtctccctgtagcccctcaacagctggact 396
Query: 425 gccaatcccaccgtgaggagctgtggacaaacacctagggctagtcggctgggcccagaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gccaatcccaccgtgaggagctgtggacaaacacctagggctagtcggctgggcccagaa 336
Query: 485 agacacatatttctttctcatttttcccttcaaatatctcctaaaagacaaaagacagaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 335 agacacatatttctttctcatttttcccttcaaatatctcctaaaagacaaaagacaaaa 276
Query: 545 ggtgaccattataagacaaatgcctgaacagtcacacagaacaaaatatttgatatccag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ggtgaccattataagacaaatgcctgaacagtcacacagaacaaaatatttgatatccag 216
Query: 605 aaatgacttca 615
|||||||||||
Sbjct: 215 aaatgacttca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_e12.g1 MSMg01no195_e12.g1 CHROMAT_FILE:
MSMg01no195_e12.g1 PHD_FILE: MSMg01no195_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:27 2005
(643 letters)
>mm_chr11_64440595_64441641
Length = 1047
Score = 1216 bits (629), Expect = 0.0
Identities = 642/647 (99%), Gaps = 4/647 (0%)
Strand = Plus / Plus
Query: 1 aggcactcagggttggcagtgccccagcatctatgtacaagttccggcttacacacaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggcactcagggttggcagtgccccagcatctatgtacaagttccggcttacacacaggg 260
Query: 61 ccagcactggccagtcccagattctccttgttgccacactgtctggctgtgagtggaagc 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 ccagcactggccagtcccagattctccttgtcgccacactgtctggctgtgagtggaagc 320
Query: 121 tacataccttcc-acccatttctaacagaggttgtattgatgttgaatcagctgttgtag 179
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacataccttcccacccatttctaacagaggttgtattgatgttgaatcagctgttgtag 380
Query: 180 tgaaaccaaaatgccagtcagctttccacaaaggcttcggctcaagaaccacttaaccaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaaaccaaaatgccagtcagctttccacaaaggcttcggctcaagaaccacttaaccaa 440
Query: 240 ctctgtctgacgtacgtgacgtctcattcaccaacaccctaattttagctaagtctatca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctgtctgacgtacgtgacgtctcattcaccaacaccctaattttagctaagtctatca 500
Query: 300 gcttcagtttgtggagtttcagtgctgttgatgtcagcagtgccttcctggcttacatct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcttcagtttgtggagtttcagtgctgttgatgtcagcagtgccttcctggcttacatct 560
Query: 360 gggtttttagaggaactggaacaatagtgaatcctctggaaattctgttatgattaaaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggtttttagaggaactggaacaatagtgaatcctctggaaattctgttatgattaaaga 620
Query: 420 ttaaatacacttctttcttaggcttagtcctgatctctgtgctggtgagagttcaatcag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaaatacacttctttcttaggcttagtcctgatctctgtgctggtgagagttcaatcag 680
Query: 480 ggagtttttttttt--gtcttagaaagagaaaaaaa-gttcttttgatcacaattttgaa 536
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 681 ggagttttttttttttgtcttagaaagagaaaaaaaagttcttttgatcacaattttgaa 740
Query: 537 ggtcactgtctatgattgattgattggtcctgtcatcttcaggctgtgtagtagttacac 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggtcactgtctatgattgattgattggtcctgtcatcttcaggctgtgtagtagttacac 800
Query: 597 tcagagagcatcaaaatgtggcagatgaaagccacacatttcatggt 643
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcagagagcatcaaaatgtggcagatgaaagccacacatttcatggt 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1047
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1037
Effective search space: 656421
Effective search space used: 656421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
