Query= MSMg01no199_c09.b1 MSMg01no199_c09.b1 CHROMAT_FILE:
MSMg01no199_c09.b1 PHD_FILE: MSMg01no199_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:36 2005
(373 letters)
>mm_chr11_101493049_101493821
Length = 773
Score = 625 bits (323), Expect = 0.0
Identities = 358/373 (95%), Gaps = 10/373 (2%)
Strand = Plus / Plus
Query: 5 gaattccagccctcagccacagccggcggggtcgcagggtgtaatagattctgcctg-tc 63
||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||
Sbjct: 205 gaattccagccctcagccacagcaggcggggtcgcagggtgtaatagattctgc-tggtc 263
Query: 64 aatgtgaaattgacagtgagatgagattggtacccactcctcattcaaatcccaaggtta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aatgtgaaattgacagtgagatgagattggtacccactcctcattcaaatcccaaggtta 323
Query: 124 ttatagcagaaacttggtggaatgcactgggcctataaaataacgggctttatcaagcta 183
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 324 ttatagcaggaacttggtggaatgcactgggcctataaaataacgggctttatcacgcta 383
Query: 184 gaccttcattcagcagggccttgcagctggctcctggcactctgtattcctttagctgct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaccttcattcagcagggccttgcagctggctcctggcactctgtattcctttagctgct 443
Query: 244 caaataatgatttaagaaagccacaaatgtgcttcctttttaaacagaccacttgttatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caaataatgatttaagaaagccacaaatgtgcttcctttttaaacagaccacttgttatc 503
Query: 304 ttttcaaatactttttttttt------gagctttcttcatgaaagggtttctctgtatag 357
||||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||
Sbjct: 504 ttttcaaatacttttttttttttttttgag-ttt-ttcgtgaaagggtttctctgtatag 561
Query: 358 ccctagctgtcct 370
|||| ||||||||
Sbjct: 562 ccctggctgtcct 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no199_c09.g1 MSMg01no199_c09.g1 CHROMAT_FILE:
MSMg01no199_c09.g1 PHD_FILE: MSMg01no199_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:36 2005
(641 letters)
>mm_chr11_101540549_101541589
Length = 1041
Score = 1154 bits (597), Expect = 0.0
Identities = 624/639 (97%), Gaps = 10/639 (1%)
Strand = Plus / Minus
Query: 1 caactccctggtggctctccaagaagctcagggctttatccagacttccagtaaatgcca 60
||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 629 caactccctggtggctctccaagaagctcagggctttatccagactt----------cca 580
Query: 61 agtgcaaccaggctggatcctaggcagtgaccagggcttgggaacaaggatggaatgatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 agtgcaaccaggctggatcctaggcagtgaccagggcttgggaacaaggatggaatgatg 520
Query: 121 tcggatgagctcagacgagggccagtgagagtcctgagaggcgcgaactgcaatatagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 519 tcggatgagctcagacgagggccagtgagagtcctgagaggcgcgaactgcaacatagga 460
Query: 181 gcagtgatccagactgggccttgcccactccagcctttgaggctccacctagagccccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gcagtgatccagactgggccttgcccactccagcctttgaggctccacctagagccccta 400
Query: 241 tactggccaggggtattctctggccacttgcccgtggcctagagaatgctcagagcaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tactggccaggggtattctctggccacttgcccgtggcctagagaatgctcagagcaaat 340
Query: 301 agtagctggtcatctgatggcacaggtgtaagagacgagccttcctctgggcagtgtgcg 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 agtagcttgtcatctgatggcacaggtgtaagagacgagccttcctctgggcagtgtgcg 280
Query: 361 tgagccgacagacagatgtgactgagctgggtctcatgtacaccaatactggtctcaaac 420
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 279 tgagccgacagacagatgtgactgagctgggtctcatgtacaccaataatggcctcaaac 220
Query: 421 ttagtgtatagcaaaggaccttgaactcctattcttcctgcttctacctccctagtgcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ttagtgtatagcaaaggaccttgaactcctattcttcctgcttctacctccctagtgcta 160
Query: 481 tgattacaggactgcttccccacatccagcttattttgtttctatgtatttatttgtttg 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 tgattacaggattgcttccccacatccagcttattttgtttctatgtatttatttgtttg 100
Query: 541 cctgtttttctttgatcaggatgtcccatagcccaggctaaccccaacttcactatgtag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 cctgtttttctttgatcaggatgtcccatagcccaggctaaccccaacttcactatgtag 40
Query: 601 ccaagtctggccaaactcccggtgctcctatacgtatgt 639
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 ccaagtctggccaaactcccggtgctcctatacgtatgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
