Query= MSMg01no199_c10.b1 MSMg01no199_c10.b1 CHROMAT_FILE:
MSMg01no199_c10.b1 PHD_FILE: MSMg01no199_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:36 2005
(679 letters)
>mm_chr11_4700688_4701767
Length = 1080
Score = 1237 bits (640), Expect = 0.0
Identities = 667/676 (98%), Gaps = 1/676 (0%)
Strand = Plus / Minus
Query: 5 gaattctcttctaccaagtgggtcctggggtcagactgaggtcaagttatcgggtataag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 gaattctcttctaccaagtgggtcctggggtcagactgaggtcaagttatcgggtataag 821
Query: 65 catgttgattcactaagctatctcagcagtccaaaaaccagcttactaaggaatatttct 124
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 820 catgttgatccactaagctatctcagcagtccaaaaaccagcttattaaggaatatttct 761
Query: 125 acattaattagatgagcatttactagtttttatatg-ttttatgttgaacaataaagtta 183
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 760 acattaattagatgagcatttactagtttttatatgtttttatgttgaacaataaagtta 701
Query: 184 gtgactttatgttagacatcttaaattctattattaactagagatgagaaattattaata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gtgactttatgttagacatcttaaattctattattaactagagatgagaaattattaata 641
Query: 244 cattttactttaactgatagatatttgtacgtattaatggagtaccatgtgattaaaaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cattttactttaactgatagatatttgtacgtattaatggagtaccatgtgattaaaaca 581
Query: 304 atttcagaggtgttatttgtgctaccatctctaatatctaataaaagtgtgagagtcaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 atttcagaggtgttatttgtgctaccatctctaatatctaataaaagtgtgagagtcaca 521
Query: 364 acaagagaagagggtggaatcctttctatctttatgtaagctgacttagcagaaacataa 423
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gcaggagaagagggtggaatcctttctatctttatgtaagctgacttagcagaaacataa 461
Query: 424 ggaaataccttgttttccataaggggctgttcagatgtgaggattcaagcctccctcctg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ggaaataccttgttttccataaggggctgttcagatgtgaggattcaagcctccctcctg 401
Query: 484 tcagcacatcagctttaaaagcttctcagacaaatagaccacgctctgactgggtggtag 543
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tcagcacatcagctttaaacgcttctcagacaaatagaccacgctctgactgggtggtag 341
Query: 544 cgcctgctttcaggtgttagaaggagcagagagattcctcttcaagtgctcacctccccc 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgcctgctttcaggtgttagaaggagcagagagattcctcttcaagtgctcacctccccc 281
Query: 604 caacacctgctgttagattggcacttctagtcacagcccaggcaccatctcagtttgcag 663
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 280 caacacctgctgttagattggtacttctggtcacagcccaggcaccatctcagtttgcag 221
Query: 664 agctgctctccttccc 679
||||||||||||||||
Sbjct: 220 agctgctctccttccc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1080
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1070
Effective search space: 715830
Effective search space used: 715830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no199_c10.g1 MSMg01no199_c10.g1 CHROMAT_FILE:
MSMg01no199_c10.g1 PHD_FILE: MSMg01no199_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:37 2005
(177 letters)
>mm_chr11_4562311_4562887
Length = 577
Score = 261 bits (135), Expect = 2e-74
Identities = 171/191 (89%), Gaps = 14/191 (7%)
Strand = Plus / Plus
Query: 1 agcaccacactaggcacttactcgcacctctgactctgggagacttgagatgtt------ 54
||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 187 agcaccacactaggcacttactcgcacctctgagtctgggagacttgagatgctcggagg 246
Query: 55 -agaattaga-------aaagaaccgctctgtcagtgtcagggcagcatgtcctgcgtgc 106
||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 247 aagaattagaccctagaaaagaaccgctctgtcagtgtcagggcagcgtgtcctgcgtgc 306
Query: 107 agcgactctggcccctggaaggaagaatcgtgcagctaagtacagagtgaggaggtaggg 166
||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 307 agcaactctggcccctggaaggaagaatcttgcagctaagtacatagtgaggaggtaggg 366
Query: 167 ctggagtgctg 177
|||||||||||
Sbjct: 367 ctggagtgctg 377
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 177
Length of database: 577
Length adjustment: 8
Effective length of query: 169
Effective length of database: 569
Effective search space: 96161
Effective search space used: 96161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
