CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATCTCTGGCCCTTCAATTCTGTTCCATTGGTCTACTTGTCTGTCA
CTATACCAGTACCATTCAGCTCTGATCACAATTGCTCTGTAGTACAGTTT
TAGGTCCGGCATGGTGATTCCACCAGAGGTTCTTTTATCCTTGAGAAGAG
TTTTTGCTATCCTCGTTTTTTTGTTATTCCAGATGAATCTGCGATTGCGC
TTTCTAATTCGTTGAAGAATTGAGTTGGAATTTTGATGGGGATTGCATTG
AATCTGTAGATTGCTTTTGGCAAGATAGCCATTTTTATAATGTTGATCCT
GCCAATCCTTGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAA
TTTCTTTCTTCAGAGACATGAAGTTCTTATCATACAGATCTTTCACTTCC
TTAGTTAGAGTCACGCCAAGATATTTTATACTATTTGTGACTATTGAGAA
GGGTGTTGTTTCCCTAATTTCTTTCTCAGCCTGTTTATTCTTTGTATAGA
GAAAGGTCATTGACTTGTTTGAGTTAATTTTATATCCAGCTACTTCACTG
AAGCTGTTTATCAGGCTTAGGAGTTCTCTGGTGGAATTTTTAGGGTCACT
TATATATACTATCATATCATCTGCAAAGAGTGATATTTTGACTTCTTCN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTTTTTATTCCTTTTGTATATGCA
ATAGTCACATTGTAGTCGGTACCCGTGAAAGGCATACTATGAGTAATTTA
ATCCTAAGCCAGAATAGAGCTTTACTTATTTTACAGTTTTTTTTAAATGG
TTTTTCTCCATAGCTCTGGCTGTTCTGGAATTCACATTATGTAGACCAGG
CTAGCCATGAACTCACAGACATACCTGCTTCTGCCTCCCAAGTGTCAGCA
CACACCACAGTGCCAGGCTTTTATTTTTCTATCTTGATACCTTAAATTCA
AAGTTCTGAGGAATAGTATAAAAACCTTTTCAACAGCTAGACATAATTTA
TGTGCACAATGTAATTTGTGTAGCAGGAATTCCTTCAAAAATTGAAATGT
TAATTTATATTTTTTTTGTTGTTGGCGAATGAATAGGGGCAAGGAAAAGC
AGACTTTTAGCTTCACTATGTATCACTCCGGCTCTGTTTTTACGTGGGTT
TGGCATGCACACAGATTTGGAGGCCAGGGGTCAAACTTGACCTCAGATAT
TTTCAGGAACTGTCCAACTTGTTTTAAAGAGAGTCTCTCACTTGGACCTG
GGCTCCCTGATTAAGCTTAGCTGGCTGGCTAGTGAGCTCTAGGGAGCCAC
CTGGCTCC

Query= MSMg01no202_e21.g1 MSMg01no202_e21.g1 CHROMAT_FILE:
MSMg01no202_e21.g1 PHD_FILE: MSMg01no202_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:04 2005
         (632 letters)



>mm_chr11_108287985_108289016
          Length = 1032

 Score = 1145 bits (592), Expect = 0.0
 Identities = 622/632 (98%), Gaps = 1/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctttttattccttttgtatatgcaatagtcacattgtagtcggtacccgtgaaaggcata 60
           ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 200 ctttttattccttttgtatatgcaatagtcacattgtagtcggtatcagtgaaaggcata 259

                                                                       
Query: 61  ctatgagtaatttaatcctaagccagaatagagctttacttattttacagtttttttt-a 119
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 260 ctatgagtaatttaatcctaagccagaatagagctttacttattttacagttttttttta 319

                                                                       
Query: 120 aatggtttttctccatagctctggctgttctggaattcacattatgtagaccaggctagc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 320 aatggtttttctccatagctctggctgttctggaattcacattatgtagaccaggctggc 379

                                                                       
Query: 180 catgaactcacagacatacctgcttctgcctcccaagtgtcagcacacaccacagtgcca 239
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 380 catgaactcacagacatacctgcttctgcctcccaagagtcagcacacaccacagtgcca 439

                                                                       
Query: 240 ggcttttatttttctatcttgataccttaaattcaaagttctgaggaatagtataaaaac 299
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 440 ggcttttatttttctatcttgataccttaaattcaaagatctgaggaatagtataaaaac 499

                                                                       
Query: 300 cttttcaacagctagacataatttatgtgcacaatgtaatttgtgtagcaggaattcctt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cttttcaacagctagacataatttatgtgcacaatgtaatttgtgtagcaggaattcctt 559

                                                                       
Query: 360 caaaaattgaaatgttaatttatattttttttgttgttggcgaatgaataggggcaagga 419
           |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 560 caaaaattgagatgttaatttatatattttttgttgttggcgaatgaataggggcaagga 619

                                                                       
Query: 420 aaagcagacttttagcttcactatgtatcactccggctctgtttttacgtgggtttggca 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaagcagacttttagcttcactatgtatcactccggctctgtttttacgtgggtttggca 679

                                                                       
Query: 480 tgcacacagatttggaggccaggggtcaaacttgacctcagatattttcaggaactgtcc 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgcacacagatttggaggccaggggtcaaacttgacctcagatattttcaggaactgtcc 739

                                                                       
Query: 540 aacttgttttaaagagagtctctcacttggacctgggctccctgattaagcttagctggc 599
           ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aacttattttaaagagagtctgtcacttggacctgggctccctgattaagcttagctggc 799

                                           
Query: 600 tggctagtgagctctagggagccacctggctc 631
           ||||||||||||||||||||||||||||||||
Sbjct: 800 tggctagtgagctctagggagccacctggctc 831


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space:   635684
Effective search space used:   635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)