Query= MSMg01no206_p17.b1 MSMg01no206_p17.b1 CHROMAT_FILE:
MSMg01no206_p17.b1 PHD_FILE: MSMg01no206_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:20 2005
(369 letters)
>mm_chr11_114854630_114855398
Length = 769
Score = 642 bits (332), Expect = 0.0
Identities = 360/378 (95%), Gaps = 14/378 (3%)
Strand = Plus / Plus
Query: 5 gaattcagtgctcatacctcacgtgaaggtggaaggggagaacggattccacgaaggtct 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gaattcagtgctcagaactcacgtgaaggtggaaggggagaacggattccacgaaggtct 250
Query: 65 gcatggactgtggcacgcat--------------acacacacacacacacacacacacac 110
||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 251 gcatggactgtggcatgcatacacacacacacacacacacacacacacacacacacacac 310
Query: 111 acacacgtcacaactatactcaactatcattaaaaataaaatgtgaggagttgagaacaa 170
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 311 acacacgtcacaactatactcaattatcattaaaaataaaatgtgaggagttgagaacaa 370
Query: 171 aaatgtttacaagagaggaaaacaatttaatgtttagggtctcatttctcttattcctgc 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aaatgtttacaagagaggaaaacaatttaatgtttagggtctcatttctcttattcctgc 430
Query: 231 tgttattactagtcccctcttcctcttcatcttaggttgcttattttctttgaaaatatc 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tgttattactagtcccctcttcctcttcatcttaggttgcttattttctttgaaaatatc 490
Query: 291 tgtttatattcatgtgcctgagtgtttgtgtctccatgcatgctattgcacctggcagtg 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tgtttatattcatgtgcctgagtgtttgtgtctccatgcatgctattgcacctggcagtg 550
Query: 351 ctcagaagagcagaggag 368
||||||||||||||||||
Sbjct: 551 ctcagaagagcagaggag 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no206_p17.g1 MSMg01no206_p17.g1 CHROMAT_FILE:
MSMg01no206_p17.g1 PHD_FILE: MSMg01no206_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:20 2005
(288 letters)
>mm_chr11_114915352_114916041
Length = 690
Score = 485 bits (251), Expect = e-141
Identities = 279/289 (96%), Gaps = 2/289 (0%)
Strand = Plus / Minus
Query: 1 tgggcagaacctgaggattagtactaatgtgatgttcatcttccttctgcggtaaggacc 60
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 489 tgggcagaacctgaggattagtactaatgtgatgttcatcttccaactgtggtaaggacc 430
Query: 61 caaggcctggggagagtcagtagcagtaggattgtgagagtcagcagtggtacctcatat 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 429 caaggcctggggagagtcagtagcagtaggattgtgggagtcagcagtggtacctcatat 370
Query: 121 tggggaaaccttatgattgagtgacattccccc--accccgatctcagttttcacatcct 178
||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 369 tggggaaaccttatgattgagtgacatccccccccaccccgatctcagttttcacatcct 310
Query: 179 gcaagcctccctgtggatgccaaggatggaggaggggctcaaggaacacagactcggggt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaagcctccctgtggatgccaaggatggaggaggggctcaaggaacacagactcggggt 250
Query: 239 ggactctgtgtttatctgattcacatcgcctttccatttccccatctct 287
|||||||||||||| | ||||||||||||||| ||||||||||||||||
Sbjct: 249 ggactctgtgtttaacagattcacatcgccttcccatttccccatctct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 690
Length adjustment: 9
Effective length of query: 279
Effective length of database: 681
Effective search space: 189999
Effective search space used: 189999
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
