Query= MSMg01no213_d21.b1 MSMg01no213_d21.b1 CHROMAT_FILE:
MSMg01no213_d21.b1 PHD_FILE: MSMg01no213_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:13 2005
(236 letters)
>mm_chr11_85395663_85396296
Length = 634
Score = 437 bits (226), Expect = e-127
Identities = 233/236 (98%), Gaps = 2/236 (0%)
Strand = Plus / Plus
Query: 1 atgtgatatagttcacctggcctaggcttattcttcacttctcttttctcccagaacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtgatatagttcacctggcctaggcttattcttcacttctcttttctcccagaacata 260
Query: 61 tgttcattgagttatgccatttatatcccacagtatatctgggaatttgagactctgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttcattgagttatgccatttatatcccacagtatatctgggaatttgagactctgtcc 320
Query: 121 cctgtgggcaccgtggatatcatgtgtgctttcagtccttctggcctcgctggtcacatg 180
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 cctgtgggcaccgtggatatcatgtgtgctttcagtccttctggcctc--tggtcacatg 378
Query: 181 gcaggacattggcttctctgtttgtttaaaactatgacgtccattttttaaaaatc 236
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gcaggacattggcttcactgtttgtttaaaactatgacgtccattttttaaaaatc 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 634
Length adjustment: 9
Effective length of query: 227
Effective length of database: 625
Effective search space: 141875
Effective search space used: 141875
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no213_d21.g1 MSMg01no213_d21.g1 CHROMAT_FILE:
MSMg01no213_d21.g1 PHD_FILE: MSMg01no213_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:13 2005
(297 letters)
>mm_chr11_85566820_85567516
Length = 697
Score = 559 bits (289), Expect = e-164
Identities = 295/297 (99%)
Strand = Plus / Minus
Query: 1 caggatagccagggctacacagagaaaccctgtctcaaaaaacaaaaacaaccctgtaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 550 caggatagccagggctacacagagaaaccctgtctcaaaaaacaaaaacaaatctgtaat 491
Query: 61 agaaggtcatataaaattaatcacaagtttgaattagatactttatctagttatttcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 agaaggtcatataaaattaatcacaagtttgaattagatactttatctagttatttcctg 431
Query: 121 aattagttattaagtccttatccaggaatgtttggggaaatgtagaacacttagacatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aattagttattaagtccttatccaggaatgtttggggaaatgtagaacacttagacatga 371
Query: 181 aattagccagaggtccctccacggtttctcagaattatagtttcttttatttctgaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aattagccagaggtccctccacggtttctcagaattatagtttcttttatttctgaatat 311
Query: 241 tttactaatgtactctggcacactcccactgaggaagaacgggattatttctgtctt 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tttactaatgtactctggcacactcccactgaggaagaacgggattatttctgtctt 254
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
