Query= MSMg01no217_c10.b1 MSMg01no217_c10.b1 CHROMAT_FILE:
MSMg01no217_c10.b1 PHD_FILE: MSMg01no217_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:30 2005
(460 letters)
>mm_chr11_85505715_85506575
Length = 861
Score = 791 bits (409), Expect = 0.0
Identities = 436/449 (97%), Gaps = 9/449 (2%)
Strand = Plus / Plus
Query: 17 gaattcaggaaatactagttctttgctacctgcttttc-agtaaatccagctcgctcctc 75
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 217 gaattcaggaaatactagttctttgctacctgcttttcaagtaaatccagctcgctcctc 276
Query: 76 cactaaatggagcaatattggaagaatttaaactatgccaatagtttgggcttttatttt 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cactaaatggagcaatattggaagaatttaaactatgccaatagtttgggcttttatttt 336
Query: 136 catagttggaaaagaaactttcacgtaatttaaaaaatattttaacctggagtaagggag 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 catagttggaaaagaaactttcacgtaatttaaaaaatattttaacctggagtaagggag 396
Query: 196 atgggtcatcagttcagagaactcgttgctctaactgaggactggaatttagttcccagc 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 atgggtcatcagttcagagaactcgttgctctaactgaggactggaatttagttcccagc 456
Query: 256 acccacccacatggaggctcaaaaccacctgtccccaaccctgggggatctcactcctaa 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 acccacccacatggaggctcaaaaccacctgtccccaaccctgggggatctcactcctaa 516
Query: 316 tccctaggcatcagacctgcatgtggtggacatgcatgcaagccggtaaaacccaagttc 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 517 tccctaggcatcagacctgcatgtggtggacatgcatgcaagccggtaaaacccaagctc 576
Query: 376 tttctccagctcatacttggcttctccctcctttcctcttcttctctg----ttttttct 431
|||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 577 tttctccagctcatacttggcttctccctcctttcctcttcttctctggccctt----ct 632
Query: 432 ccccccccctctcacagacttgactccta 460
|| || ||||||||||||| |||||||||
Sbjct: 633 cctcctccctctcacagacatgactccta 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 861
Length adjustment: 10
Effective length of query: 450
Effective length of database: 851
Effective search space: 382950
Effective search space used: 382950
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_c10.g1 MSMg01no217_c10.g1 CHROMAT_FILE:
MSMg01no217_c10.g1 PHD_FILE: MSMg01no217_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:30 2005
(284 letters)
>mm_chr11_85554605_85555288
Length = 684
Score = 542 bits (280), Expect = e-158
Identities = 283/284 (99%)
Strand = Plus / Minus
Query: 1 tgtagtgaaccactacgttgtcttggtcacagacactgtgacccaccacagtacaatttc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 484 tgtagtgaaccactacgttgtcttggtcacagacactgtgacccaccaaagtacaatttc 425
Query: 61 tagttgatctcctgaatcctactgcacaggatggaatgggagcatatggccatgtgcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tagttgatctcctgaatcctactgcacaggatggaatgggagcatatggccatgtgcagt 365
Query: 121 tctgcacttggtctaccaaaaccggtggccttgaccattggtgatccctgaccacatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tctgcacttggtctaccaaaaccggtggccttgaccattggtgatccctgaccacatggt 305
Query: 181 aatggcctgagggcatgtgagctgtgaaaatctccagcccacatgtaaaagccaggtata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aatggcctgagggcatgtgagctgtgaaaatctccagcccacatgtaaaagccaggtata 245
Query: 241 cacctgtaaccctagtggtaggtgacaaagtcaggtagaacttg 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cacctgtaaccctagtggtaggtgacaaagtcaggtagaacttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
