Query= MSMg01no231_i08.b1 MSMg01no231_i08.b1 CHROMAT_FILE:
MSMg01no231_i08.b1 PHD_FILE: MSMg01no231_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:50 2005
(679 letters)
>mm_chr11_69327815_69328893
Length = 1079
Score = 1276 bits (660), Expect = 0.0
Identities = 672/676 (99%)
Strand = Plus / Minus
Query: 4 ggaattccttacctgctgtccttgatttattctgagagaaagtgagggaggctgcagatg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 ggaattccttacctgctgtccttgatttattctgagagaaagtgagggaggctgcagatg 820
Query: 64 actgggctgaggtgggcccggggtgccctgaactagaagtcctcaggccctgtgtttctc 123
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 819 actgggctgaggtgggcccggggtgccctgaactagaagccctcaggccctgtgtttctc 760
Query: 124 ctccagctgttgtcctgggggtgctcacattgcctctccttgtgcgcccaccttcacggt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 759 ctccagctgttgtcctgggggtgctcacattgcctctccttgtgcgcccaccttcacagt 700
Query: 184 gtggcgtcctccctctgtagcacagcctcagcctccttccaggggctgaggggtgagcag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gtggcgtcctccctctgtagcacagcctcagcctccttccaggggctgaggggtgagcag 640
Query: 244 gtacctgtgtcgcaggtctgtataaatgagcttcccctttgtctcccccacccctaccca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gtacctgtgtcgcaggtctgtataaatgagcttcccctttgtctcccccacccctaccca 580
Query: 304 gtgcctttccggagcccacttcctgccccatactgcgactggcgaggagagcatacatac 363
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 579 gtgcctttccggagcccacttcctgccccatattgggactggcgaggagagcatacatac 520
Query: 364 ctatcagcagatggctcaagccattgatgaaatggttcgaaaaaccttccaagagtggac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ctatcagcagatggctcaagccattgatgaaatggttcgaaaaaccttccaagagtggac 460
Query: 424 agcgacgctggacaaggactgcattcggcgactggacatgtcactgttacgaattagcca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 agcgacgctggacaaggactgcattcggcgactggacatgtcactgttacgaattagcca 400
Query: 484 ggagaaagtgggcatgctggatgtcaactttgacaagtacaggacccaccctggcacctc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ggagaaagtgggcatgctggatgtcaactttgacaagtacaggacccaccctggcacctc 340
Query: 544 cccctgtccttggtgctagtctcctctcactctcccaagaccttaactcccatcttgggt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cccctgtccttggtgctagtctcctctcactctcccaagaccttaactcccatcttgggt 280
Query: 604 cccctcttccatccctatctttcctgatgtctgctttaattgaggctggttttcaccatg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 cccctcttccatccctatctttcctgatgtctgctttaattgaggctggttttcaccatg 220
Query: 664 tagttcaggctggctt 679
||||||||||||||||
Sbjct: 219 tagttcaggctggctt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no231_i08.g1 MSMg01no231_i08.g1 CHROMAT_FILE:
MSMg01no231_i08.g1 PHD_FILE: MSMg01no231_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:50 2005
(293 letters)
>mm_chr11_69201071_69201763
Length = 693
Score = 538 bits (278), Expect = e-157
Identities = 290/294 (98%), Gaps = 1/294 (0%)
Strand = Plus / Plus
Query: 1 cttgtctgcaaggatgtatgcgcaccactgtgtgctagtcccctcaggccagaagacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cttgtctgcaaggatgtatgcgcaccactgtgtgctagtcccctcaggccagaagacagc 259
Query: 61 atcaagtcccctggaactgcagttatggatgct-gtgaactaccattcgggtcctgggaa 119
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 260 atcaagtcccctggaactgcagttatggatgcttgtgaactaccattcgggtcctgggaa 319
Query: 120 ttgaaccctggtcttctgctagggcagtaagtgctctgaactgctgagccagctcctcac 179
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttgaaccctggtcttctgcaagggcagtaagtgctctgaactgctgagccagctcctcac 379
Query: 180 actagtaatgttcattcctgacatgagcacttccttgttaaaatcctgggccaggcactg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 actagtaatgttcattcctgacatgagcacttccttgttaaaatcctgggccaggcactg 439
Query: 240 tacgattattgggcacacagggatgatttggttggacagctgagttcccactga 293
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 440 tacgattattgggcacacagggatgatctgggtggacagctgagttcccactga 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
