Query= MSMg01no232_b06.b1 MSMg01no232_b06.b1 CHROMAT_FILE:
MSMg01no232_b06.b1 PHD_FILE: MSMg01no232_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:29 2005
(315 letters)
>mm_chr11_85150218_85150932
Length = 715
Score = 572 bits (296), Expect = e-168
Identities = 308/312 (98%)
Strand = Plus / Plus
Query: 4 ggaattctcttgtccctagtgtgattgtatgggttttaaatattgtcagttgttgtgcac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcttgtccctagtgtgattgtatgggttttaaatattgtcagttgttgtgcac 263
Query: 64 ctataggaacagactagggactgtcctttagtcagcgatgtgcctctcttgaaagtaata 123
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 264 ctataggaacagactagggactgtcctttagtcagtgatgtgcctctcttgaaagtaata 323
Query: 124 gtgcttcttctgccccctttccctaggtgacttgtggagctatgatttcttcagtggtaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtgcttcttctgccccctttccctaggtgacttgtggagctatgatttcttcagtggtaa 383
Query: 184 gtttgtggtgtcacctgaaccagacaccagtgtccacactcttgacccccggaagctcaa 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 384 gtttgtggtgtcacctgaaccagacaccagtgtccacactcttgacccccggaagcacaa 443
Query: 244 gtatatcatcctgggaagtgatggactttggaatatgtttccacctcaagatgccatctc 303
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 444 gtatattatcctgggaagtgatggactttggaatatggttccacctcaagatgccatctc 503
Query: 304 catgtgccaaga 315
||||||||||||
Sbjct: 504 catgtgccaaga 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no232_b06.g1 MSMg01no232_b06.g1 CHROMAT_FILE:
MSMg01no232_b06.g1 PHD_FILE: MSMg01no232_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:29 2005
(256 letters)
>mm_chr11_85261868_85262523
Length = 656
Score = 453 bits (234), Expect = e-132
Identities = 252/260 (96%), Gaps = 6/260 (2%)
Strand = Plus / Minus
Query: 1 ctgttgtcaggtttgcagaacaaacacatttatccataagacatcccatgacctaaatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 311 ctgttgtcaggtttgcagaacaaacacatttatccataagacatcccatgatctaaatga 252
Query: 61 ctgattctggataataaatctcttacttataaagaaaaaaaaaaaaaa----aaaagaaa 116
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 251 ctgattctggataataaatctcttacttataaagaaaaaaaaaaaaaaaaagaaaagaaa 192
Query: 117 atgcctccataagatcaggctgtaggcaatactgtagagcattctc-taaattagtgaat 175
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 191 atgcctccataagatcaggctgtaggcaatactgtagagcattctcgt-aattagtgaat 133
Query: 176 gatgtggaaggaagcagccttactgtgggtggcgccatccccaggctggtggtattgggg 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 132 gatgtggaaggaagcagccttactgtgggtggcgccatccccaggctggtggtactgggg 73
Query: 236 tctctaagaacacaggctga 255
||||||||||||||||||||
Sbjct: 72 tctctaagaacacaggctga 53
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 256
Length of database: 656
Length adjustment: 9
Effective length of query: 247
Effective length of database: 647
Effective search space: 159809
Effective search space used: 159809
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
