Query= MSMg01no232_j23.b1 MSMg01no232_j23.b1 CHROMAT_FILE:
MSMg01no232_j23.b1 PHD_FILE: MSMg01no232_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:09 2005
(249 letters)
>mm_chr11_64941367_64942015
Length = 649
Score = 445 bits (230), Expect = e-129
Identities = 243/248 (97%), Gaps = 5/248 (2%)
Strand = Plus / Minus
Query: 2 aaaaaaaaaa-cagagaaaaagagagatacagacagacacagacacatacagaatacaca 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aaaaaaaaaagcagagaaaaagagagatacagacagacacagacacatacagaatacaca 461
Query: 61 gacacacacacacgctaatcatggaagcagagctgtacagttaaggttggcttcatctgg 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 g--acacacacacgctaatcatggaagcagagctgtacagttaaggttggcttcatctgg 403
Query: 121 agtatacatctctgtctgaattttcattttttccatataaatgtattcacattgagagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 agtatacatctctgtctgaattttcattttttccatataaatgtattcacattgagagga 343
Query: 181 aaaggtcag-gattctgaggtatgatttataacagaacaagcgagatctgtgatatattg 239
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aaaggtcagcg-ttctgaggtatgatttataacagaacaagcgagatctgtgatatattg 284
Query: 240 ttgttgtt 247
||||||||
Sbjct: 283 ttgttgtt 276
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no232_j23.g1 MSMg01no232_j23.g1 CHROMAT_FILE:
MSMg01no232_j23.g1 PHD_FILE: MSMg01no232_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:09 2005
(219 letters)
>mm_chr11_64801788_64802406
Length = 619
Score = 412 bits (213), Expect = e-120
Identities = 216/217 (99%)
Strand = Plus / Plus
Query: 3 caaatttcagaataaatgcccaggcaaataaattattttacctatttctaccctatatga 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 caaatttcagaataaatgcccaggcaaataaattattttacctatttctaccctatatga 262
Query: 63 gttttcttccctcgcctacattgagactaataagttagggcagagtgtcaaagaccctgt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gttttcttccctcgcctacattgagactaataagttagggcagagtgtcaaagaccctgt 322
Query: 123 ggcctactctgtgctagggacagtctaagcattgaaatatctctctggctcaagtgttgt 182
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggcctactctatgctagggacagtctaagcattgaaatatctctctggctcaagtgttgt 382
Query: 183 gtctactggaaaacagccagttctgcagcttcagtcc 219
|||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtctactggaaaacagccagttctgcagcttcagtcc 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 619
Length adjustment: 9
Effective length of query: 210
Effective length of database: 610
Effective search space: 128100
Effective search space used: 128100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
