Query= MSMg01no233_i14.b1 MSMg01no233_i14.b1 CHROMAT_FILE:
MSMg01no233_i14.b1 PHD_FILE: MSMg01no233_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:15 2005
(319 letters)
>mm_chr11_4184619_4185337
Length = 719
Score = 567 bits (293), Expect = e-166
Identities = 308/313 (98%)
Strand = Plus / Minus
Query: 5 gaattctttccctgtccctgccatggtaaaccacagaaaattgtggcttaaaacagcagg 64
||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 517 gaattctttccctgtggctgccatggtaaaccacagaaaattatggcttaaaacagcagg 458
Query: 65 cacctaggttcgcccgcagttctggaggccagaccatccagaggtcccaccttgcctcct 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cacctaggttcgcctgcagttctggaggccagaccatccagaggtcccaccttgcctcct 398
Query: 125 gcaggttgagggacccactcccctcacaatccaggatggtgtcatctagggacccttgac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gcaggttgagggacccactcccctcacaatccaggatggtgtcatctagggacccttgac 338
Query: 185 ttagatacatctacagtgaccacatttttggcaaatgtgatcacattcttgtgtctgtct 244
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttagttacatctacagtgaccacatttttggcaaatgtgatcacattcttgtgtctgtct 278
Query: 245 tttgggaagatcaccattgcaccaaggctagagttggtcatctcatacctcattttatgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tttgggaagatcaccattgcaccaaggctagagttggtcatctcatacctcattttatgt 218
Query: 305 tcgtgatgctgga 317
|||||||||||||
Sbjct: 217 tcgtgatgctgga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no233_i14.g1 MSMg01no233_i14.g1 CHROMAT_FILE:
MSMg01no233_i14.g1 PHD_FILE: MSMg01no233_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:15 2005
(285 letters)
>mm_chr11_4011300_4011984
Length = 685
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Plus
Query: 1 cacatgctgcaaatacacagatttaggaagtacgaagcggaagaattaggaagcatgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacatgctgcaaatacacagatttaggaagtacgaagcggaagaattaggaagcatgagg 260
Query: 61 tgcgtggtgggggtggggtcttgaataggaactaggtcagcacaagccgaccaccagacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcgtggtgggggtggggtcttgaataggaactaggtcagcacaagccgaccaccagacc 320
Query: 121 acaggtgacccctaaaaggacctgaacaggagtagaaaaggaggccccagtttcttcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaggtgacccctaaaaggacctgaacaggagtagaaaaggaggccccagtttcttcagc 380
Query: 181 tacctcagcaagaatatcattgttgattgctccagaggtaggaaaacctgatatttccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacctcagcaagaatatcattgttgattgctccagaggtaggaaaacctgatatttccag 440
Query: 241 ggaaggaattgcactttgtccctcagggataaagcaacaatcgtt 285
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaaggaaatgcactttgtccctcagggataaagcaacaatcgtt 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
