Query= MSMg01no233_l16.b1 MSMg01no233_l16.b1 CHROMAT_FILE:
MSMg01no233_l16.b1 PHD_FILE: MSMg01no233_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:30 2005
(276 letters)
>mm_chr11_86800180_86800858
Length = 679
Score = 476 bits (246), Expect = e-139
Identities = 266/274 (97%), Gaps = 6/274 (2%)
Strand = Plus / Minus
Query: 5 gaattcttttagaa-atagtgccagaaaaagctttggcccttcagaggaactggtatgcc 63
|||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 415 gaattcttttagaacatagtgccaggaaaagctttggcccttcagagggactggtatgcc 356
Query: 64 tttttttttctttctttttttgggacaattggaaatttataactgctcatatttctcttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tttttttttctttctttttttgggacaattggaaatttataactgctcatatttctcttt 296
Query: 124 ttgctatggttgcc-aggaagtacagagccaaaactgtggcttgctccacagaggtctgc 182
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttgctatggttgccaaggaagtacagagccaaaactgtggcttgctccacagaggtctgc 236
Query: 183 atcctaa-ttttttcccagtgttaaccttattttttgttttttgtttttgtttgt---tt 238
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 235 atcctaatttttttcccagtgttaaccttattttttgttttttgtttttgtttgtttgtt 176
Query: 239 tttttttgtttcatatgaataacttgtaacttta 272
||||||||||||||||||||||||||||||||||
Sbjct: 175 tttttttgtttcatatgaataacttgtaacttta 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 679
Length adjustment: 9
Effective length of query: 267
Effective length of database: 670
Effective search space: 178890
Effective search space used: 178890
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no233_l16.g1 MSMg01no233_l16.g1 CHROMAT_FILE:
MSMg01no233_l16.g1 PHD_FILE: MSMg01no233_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:30 2005
(286 letters)
>mm_chr11_86683087_86683772
Length = 686
Score = 553 bits (286), Expect = e-162
Identities = 286/286 (100%)
Strand = Plus / Plus
Query: 1 aataatgtatatagatagcagttttactgaatcaaatggccttcttctttagacccaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataatgtatatagatagcagttttactgaatcaaatggccttcttctttagacccaatg 260
Query: 61 aaaagtaaggattgggtatgatgctcaatgggagggtacttacccagcatgtggaaggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaagtaaggattgggtatgatgctcaatgggagggtacttacccagcatgtggaaggtt 320
Query: 121 catctccaacaacttctctgcaaagggtcaaatgcatgagttgttccagtgttgggagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catctccaacaacttctctgcaaagggtcaaatgcatgagttgttccagtgttgggagag 380
Query: 181 aggacagttggactgttgtgtagcatcctctgctgatgtcatacctaaatttggatccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggacagttggactgttgtgtagcatcctctgctgatgtcatacctaaatttggatccca 440
Query: 241 acaagtacttctaggtggtataagaacagtcccttacatctgtcca 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaagtacttctaggtggtataagaacagtcccttacatctgtcca 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
