Query= MSMg01no236_e16.b1 MSMg01no236_e16.b1 CHROMAT_FILE:
MSMg01no236_e16.b1 PHD_FILE: MSMg01no236_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:49 2005
(606 letters)
>mm_chr11_77603462_77604467
Length = 1006
Score = 1112 bits (575), Expect = 0.0
Identities = 599/607 (98%), Gaps = 1/607 (0%)
Strand = Plus / Plus
Query: 1 attacatagcaaatttgatgccagcctgggctacatgagatcctgtattaaaaccaaaga 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
Sbjct: 200 attacatagcaaatttgatgccagcctgggctacatgagaccctgtattaaaacaaaaca 259
Query: 61 aaagaaaa-caaaacaaaacaaaatcatcaaatgagaaacctgatgaatcctttgtttct 119
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaagaaaagaaaaacaaaacaaaatcatcaaatgagaaacctgatgaatcctttgtttct 319
Query: 120 agaatttgccattaagttgttttggactgcagttgactgtggctaactgaaactgtagca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agaatttgccattaagttgttttggactgcagttgactgtggctaactgaaactgtagca 379
Query: 180 ggtgggaccaggactgtggggatgactgtggggatgacgatcattcggggctccagagag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggtgggaccaggactgtggggatgactgtggggatgacgatcattcggggctccagagag 439
Query: 240 agagcagcaccctcgtcaatccacttctgaaccccaggaagtgcttggtgtctggagtga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agagcagcaccctcgtcaatccacttctgaaccccaggaagtgcttggtgtctggagtga 499
Query: 300 gaccgtctgtgtgcagaagtgctgcaggctctgttcctgttaaggacgcagctgcgtgtt 359
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 500 gaccatctgtgtgcagaagtgctgcaggctctgttccagttaaggacgcagctgcgtgtt 559
Query: 360 ctttgctcgtgtcctcggggtagtgccttttcccacagtgtccttccagtggagctgggg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctttgctcgtgtcctcggggtagtgccttttcccacagtgtccttccagtggagctgggg 619
Query: 420 aagcagcctgagcttcctcagggtccctctgagcatggacagcttgccctgagctccagc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aagcagcctgagcttcctcagggtccctctgagcatggacagcttgccctgagctccagc 679
Query: 480 ctgctctttatagtttcactcccgctcttcaaaccgtgctgagttttctctgtctgtctg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctgctctttatagtttcactcccgctcttcaaaccgtgctgagttttctctgtctgtctg 739
Query: 540 ggaccagtgcctttgagctccaggtcttctgtttgttttccagttgatgagcttactctg 599
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 740 ggaccagtgcctttgagctccaggtcttctgtttgttttccagttgataagcttactctg 799
Query: 600 ctctttg 606
|||||||
Sbjct: 800 ctctttg 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_e16.g1 MSMg01no236_e16.g1 CHROMAT_FILE:
MSMg01no236_e16.g1 PHD_FILE: MSMg01no236_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:49 2005
(286 letters)
>mm_chr11_77761312_77761996
Length = 685
Score = 507 bits (262), Expect = e-148
Identities = 277/282 (98%), Gaps = 1/282 (0%)
Strand = Plus / Minus
Query: 1 ccgtggctccctgcagagctccaaggggctggagctgctagtctacccttctgggtctgg 60
|||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||
Sbjct: 481 ccgtggctccctgcagagctccaaggggctggggctgctagcctaaccttctgggtctgg 422
Query: 61 aaaacaccctcctcagacttcctcagtccccttatagcaagagatttcctgcaaccccta 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 421 aaaacaccctcctcagacttcctcagtcccc-tatagcaagagatttcctgcaaccccta 363
Query: 121 gccctgggcactgcagcatgggccctccccccgcattagctcttaagctatgcaaataga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gccctgggcactgcagcatgggccctccccccgcattagctcttaagctatgcaaataga 303
Query: 181 catcggagggagccctgtttaaagtatttagacgaaatgaaaaaaggctttcatcggcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 catcggagggagccctgtttaaagtatttagacgaaatgaaaaaaggctttcatcggcac 243
Query: 241 taatgatccattcaggatgcctccccagtggattctctcccg 282
|||||| |||||||||||||||||||||||||||||||||||
Sbjct: 242 taatgagccattcaggatgcctccccagtggattctctcccg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 685
Length adjustment: 9
Effective length of query: 277
Effective length of database: 676
Effective search space: 187252
Effective search space used: 187252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
