Query= MSMg01no236_m10.b1 MSMg01no236_m10.b1 CHROMAT_FILE:
MSMg01no236_m10.b1 PHD_FILE: MSMg01no236_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:25 2005
(625 letters)
>mm_chr11_28705857_28706881
Length = 1025
Score = 1164 bits (602), Expect = 0.0
Identities = 617/622 (99%), Gaps = 2/622 (0%)
Strand = Plus / Plus
Query: 5 gaattctcacat-tttccttaacttgagcaacaacatcccaacaatttgttttcctcctt 63
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcacatattt-cttaacttgagcaacaacatcccaacaatttgttttcctcctt 263
Query: 64 tatctatttaggccctgctgataggtatgactgtaaggagtacccatgtatatagtgaaa 123
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatctatttaggtcatgctgataggtatgactgtaaggagtacccatgtatatagtgaaa 323
Query: 124 tcttcctagaaaacagtggcattttaaaggcctgaagcctataaaaaaggaaagccctgg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcttcctagaaaacagtggcattttaaaggcctgaagcctataaaaaaggaaagccctgg 383
Query: 184 tttacaagtaaggaaccatgtcgtgcccagcatgactccagagatggacctgactaaggt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttacaagtaaggaaccatgtcgtgcccagcatgactccagagatggacctgactaaggt 443
Query: 244 ggtgaaggcatgaaaacaagacagacacaggtacaaacctgggatcaggctgtctaggct 303
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 444 ggtgaaggcatgaaaacaagacagacacagggacaaacctgggatcaggctgtctaggct 503
Query: 304 ctcagttggaggaggcacagcagctcagaatctcagcatgtttattacatagtggatcag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctcagttggaggaggcacagcagctcagaatctcagcatgtttattacatagtggatcag 563
Query: 364 ggaagcagggttatggcatacagataaacagggagacagggttgatggggcacagctgga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggaagcagggttatggcatacagataaacagggagacagggttgatggggcacagctgga 623
Query: 424 tcaaggagacacatttagctaatctagttataagcagtctctgctggggaacagtcctca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tcaaggagacacatttagctaatctagttataagcagtctctgctggggaacagtcctca 683
Query: 484 acccataaaaaactggggcggaaggggggtggcctgtggtagaaattttctgcacacaat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 acccataaaaaactggggcggaaggggggtggcctgtggtagaaattttctgcacacaat 743
Query: 544 gttaacacttgcacgtagctccccattgaagactttgccatttacctctgaacctcaccc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gttaacacttgcacgtagctccccattgaagactttgccatttacctctgaacctcaccc 803
Query: 604 caggattttgctatttctccat 625
||||||||||||||||||||||
Sbjct: 804 caggattttgctatttctccat 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_m10.g1 MSMg01no236_m10.g1 CHROMAT_FILE:
MSMg01no236_m10.g1 PHD_FILE: MSMg01no236_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:25 2005
(280 letters)
>mm_chr11_28844897_28845576
Length = 680
Score = 522 bits (270), Expect = e-153
Identities = 278/282 (98%), Gaps = 4/282 (1%)
Strand = Plus / Minus
Query: 1 ctatgaacactgtgaaatagcaaggcttgttagtggtgagtgctgtcc--gttcttcgtc 58
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 414 ctatgaacactgtgaaatagcaaggcttgttagtggtgagtgctg--caagttcttcgtc 357
Query: 59 ttaggtcactatttacttttgttaatgtctaccttagagcagcatctgattcctaacatg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ttaggtcactatttacttttgttaatgtctaccttagagcagcatctgattcctaacatg 297
Query: 119 cagtcatgatataccttatgcagtgggtatgacacccagaaaatattttgaaaattgtcc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 cagtcatgatataccttatgcagtgggtatgacacccagaaaatattttgaaaattgtcc 237
Query: 179 accgtcttgtttcatgattcattcctctttattaattgtgtgtgtgtgtgtgtgtgtgtg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 accgtcttgtttcatgattcattcctctttattaattgtgtgtgtgtgtgtgtgtgtgtg 177
Query: 239 tgtgtgtgtgtgtgcctgtatctgaaggccaaaaccaaaagc 280
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tgtgtgtgtgtgtgcctgtatctgaaggccaaaaccaaaagc 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
