XXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGAATTCAATA
AACCTGCACGCAAATATTCTACTTTCTCATCTATTTTTTTTTAAGAAAAA
AATACAGCTTGGCTGTTGGACTTGACACATGGGCCACAGTTCTGATTTTT
TTCCTGTGACAGTCCATTTCAAGCAGCATTTGTGACCATGGCCCTCTCTT
GTCCAAAGCCACCTCACCCCCACCCACTAGAACCAATAATTAACTAATTT
TGTGTCTTTTATACAATGTCCCAGTCATATGAGGGGTAAAGGCTGAGGCT
GGCGCAAAGGTTGTTCCAAGGACATGCAGTGACCCCTGTGGTATCTATCA
TTCCAATTCCTGCTTTTTGTGGTTTACAGACACGATCCAAACAAAAAGCC
GAACACGACAACGCCGAACATGACAATGCTGTTTCCTCAATGTCTGTGGT
CATTGTTTGCCATATTAGGGCAAAGCTAAGCACAAAAGGAGACAGCTTTC
TTTAAAAGCTCACAAAATTGCACCCAACCTATTAGGCATATCAGGATAGA
CCAGCATGCTAGTAAACGATTTACCCAGCTGAACGTCCTGGGCTCAATGA
TGCTGTCAGCAGCAACAGCCCAGTTGTAGATTGCCTAATGTGTGTTGAAT
GGCCTGGATAATCAGACACCTGCCAGCTTCATGCACAGCCGTGGTGCGAA
AAATGAGGCGGCCAGGTTCCTGTGATAACAAATGTAGCTGGAAACAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXACTTGCTTTTTTCTTTTTCCCCTTTTCTTTCTTT
TTCTCTCTTTCTCTCTCTCTTTCTTTCTTTCTTTCTCTCTCTCTTCCTTT
CTTTCTTTCTATCTTCCTTCCTTCCTTCCTGTCTTTCTTTCTTTCTTTCT
CTCTCTCTCTCTTTCTTTCTCTCTTCCTTCCTTTCTTCCTTCCTTCCTTC
CTTCCTTCCTTTCTTCTTTCTTTCTTTCTTTCTTTTTTTTGATAAGGTCT
TTTGTAGTCCAATGAAATCACTGTATAAACAAGGTTAGCCTTGAACTACT
GATCCTCCTGTCTCCACCCAGCAAGGTGTCAGTCAATATGCTGTGCTTTT
GAGTACCCTCCTGAGGGATCAGCTCAAGGTATCTTAGCTCCTTATCTTTA
CACATTGTCTGCCTGGAGGGTGGAGCTGGGGCCAGTCTGATCCACTGACT
CTGAATGATACTGGACATTCCCCAGCAATGGGATCCCACTCAAGTTCTTT
TGCTTATCTTTGTCTAGCGCCAGCATTCAGAACAGAGGGATGCCACCACA
ACTGTTTCCCTGAAGGCCTCAGCCTGATAAAGGACAGGGCAATGGAACGC
TGGAATATTCCTGGTAGCTGTCCCTCTAAAAGAGCACCGTTCTTAATTGT
CAAGACCGAACTCCTTGAGGTCCCGCTTTTGTAACCCCCATGCCGCCCTG
CCCTT

Query= MSMg01no262_c22.b1 MSMg01no262_c22.b1 CHROMAT_FILE:
MSMg01no262_c22.b1 PHD_FILE: MSMg01no262_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:46 2005
         (592 letters)



>mm_chr11_89408782_89409772
          Length = 991

 Score = 1114 bits (576), Expect = 0.0
 Identities = 585/588 (99%), Gaps = 1/588 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggaattcaataaacctgcacgcaaatattctactttctcatctatttttttttaagaaaa 64
           ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcaataaacctg-aggcaaatattctactttctcatctatttttttttaagaaaa 263

                                                                       
Query: 65  aaatacagcttggctgttggacttgacacatgggccacagttctgatttttttcctgtga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaatacagcttggctgttggacttgacacatgggccacagttctgatttttttcctgtga 323

                                                                       
Query: 125 cagtccatttcaagcagcatttgtgaccatggccctctcttgtccaaagccacctcaccc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagtccatttcaagcagcatttgtgaccatggccctctcttgtccaaagccacctcaccc 383

                                                                       
Query: 185 ccacccactagaaccaataattaactaattttgtgtcttttatacaatgtcccagtcata 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccacccactagaaccaataattaactaattttgtgtcttttatacaatgtcccagtcata 443

                                                                       
Query: 245 tgaggggtaaaggctgaggctggcgcaaaggttgttccaaggacatgcagtgacccctgt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgaggggtaaaggctgaggctggcgcaaaggttgttccaaggacatgcagtgacccctgt 503

                                                                       
Query: 305 ggtatctatcattccaattcctgctttttgtggtttacagacacgatccaaacaaaaagc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggtatctatcattccaattcctgctttttgtggtttacagacacgatccaaacaaaaagc 563

                                                                       
Query: 365 cgaacacgacaacgccgaacatgacaatgctgtttcctcaatgtctgtggtcattgtttg 424
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cgaacacgacaatgccgaacatgacaatgctgtttcctcaatgtctgtggtcattgtttg 623

                                                                       
Query: 425 ccatattagggcaaagctaagcacaaaaggagacagctttctttaaaagctcacaaaatt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccatattagggcaaagctaagcacaaaaggagacagctttctttaaaagctcacaaaatt 683

                                                                       
Query: 485 gcacccaacctattaggcatatcaggatagaccagcatgctagtaaacgatttacccagc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gcacccaacctattaggcatatcaggatagaccagcatgctagtaaacgatttacccagc 743

                                                           
Query: 545 tgaacgtcctgggctcaatgatgctgtcagcagcaacagcccagttgt 592
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgaacgtcctgggctcaatgatgctgtcagcagcaacagcccagttgt 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 991
Length adjustment: 10
Effective length of query: 582
Effective length of database: 981
Effective search space:   570942
Effective search space used:   570942
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)