MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-263I18
Chromosome	11 (Build37)
Map Location	7,053,466 - 7,053,793
singlet/doublet	singlet
Overlap gene	Adcy1
Upstream gene	Nudcd3, LOC100042173, Npc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, Ccm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332
Downstream gene	LOC100041347, Igfbp1, Igfbp3
Link	Open Mouse BAC browser

Click to get alignment info.

name	Nudcd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209586 MGI:2144158
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042173 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042173
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 884 ESTs, 3 Proteins

name	Npc1l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237636 MGI:2685089
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041242 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041242
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC665250 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins pseudo : _no_value

name	Ddx56 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52513 MGI:1277172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmed4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103694 MGI:1915070
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ogdh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18293 MGI:1098267
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042227 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Zmiz2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52915 MGI:106374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ppia (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268373 MGI:97749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	H2afv (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77605 MGI:1924855
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 176 ESTs, 39 Proteins

name	LOC665277 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 327 ESTs, 2 Proteins pseudo : _no_value

name	LOC665283 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665283
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 88 ESTs, 7 Proteins

name	LOC626342 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626342
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Purb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19291 MGI:1338779
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myo1g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246177 MGI:1927091
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041286 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Ccm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216527 MGI:2384924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665327 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665327
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 34 ESTs, 10 Proteins pseudo : _no_value

name	AB182283 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192950 MGI:3603030
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tbrg4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21379 MGI:1100868
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22373 MGI:98943
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041311 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041311
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Ramp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56089 MGI:1860292
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665314 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665314
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	LOC626419 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626419
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC665339 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 5 Proteins pseudo : _no_value

name	LOC665343 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665343
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 240 ESTs, 2 Proteins pseudo : _no_value

name	LOC100041332 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Adcy1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432530 MGI:99677
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041347 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041347
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs

name	Igfbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16006 MGI:96436
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Igfbp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16009 MGI:96438
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nudcd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803279 GeneID:209586 MGI:2144158
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NudC domain containing 3 transcript_id : NM_173748.3

name	LOC100042173 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261634 GeneID:100042173
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 884 ESTs, 3 Proteins product : similar to hCG1994130 transcript_id : XM_001478643.1

name	Npc1l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402232 GeneID:237636 MGI:2685089
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NPC1-like 1 transcript_id : NM_207242.1

name	LOC100041242 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261598 GeneID:100041242
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100041242 transcript_id : XM_001476031.1

name	Ddx56 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893145 GeneID:52513 MGI:1277172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 transcript_id : NM_026538.3

name	Tmed4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527235 GeneID:103694 MGI:1915070
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane emp24 protein transport domain containing 4 transcript_id : NM_134020.1

name	Ogdh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114796649 GeneID:18293 MGI:1098267
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oxoglutarate dehydrogenase (lipoamide) transcript_id : NM_010956.3

name	LOC100042227 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261639 GeneID:100042227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100042227 transcript_id : XM_001478677.1

name	Zmiz2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54607099 GeneID:52915 MGI:106374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, MIZ-type containing 2 transcript_id : NM_028601.2

name	Zmiz2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54607101 GeneID:52915 MGI:106374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, MIZ-type containing 2 transcript_id : NM_001005867.1

name	Ppia (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679438 GeneID:268373 MGI:97749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidylprolyl isomerase A transcript_id : NM_008907.1

name	H2afv (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261600 GeneID:77605 MGI:1924855
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 176 ESTs, 39 Proteins product : H2A histone family, member V transcript_id : XM_001476068.1

name	LOC665283 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94389891 GeneID:665283
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 88 ESTs, 6 Proteins product : similar to SMT3B protein transcript_id : XM_975835.1

name	Purb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802243 GeneID:19291 MGI:1338779
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : purine rich element binding protein B transcript_id : NM_011221.2

name	Myo1g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801948 GeneID:246177 MGI:1927091
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin IG transcript_id : NM_178440.3

name	LOC100041286 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261602 GeneID:100041286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100041286 transcript_id : XM_001476101.1

name	Ccm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130250 GeneID:216527 MGI:2384924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cerebral cavernous malformation 2 homolog (human) transcript_id : NM_146014.2

name	AB182283 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126116573 GeneID:192950 MGI:3603030
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence AB182283 transcript_id : NM_001081652.1

name	Tbrg4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20589520 GeneID:21379 MGI:1100868
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming growth factor beta regulated gene 4 transcript_id : NM_134011.1

name	Wap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802335 GeneID:22373 MGI:98943
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : whey acidic protein transcript_id : NM_011709.4

name	Ramp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384664 GeneID:56089 MGI:1860292
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : receptor (calcitonin) activity modifying protein 3 transcript_id : NM_019511.2

name	LOC626419 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94389893 GeneID:626419
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC626419 transcript_id : XM_899362.2

name	Adcy1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61888831 GeneID:432530 MGI:99677
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylate cyclase 1 transcript_id : NM_009622.1

name	LOC100041347 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261605 GeneID:100041347
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs product : hypothetical protein LOC100041347 transcript_id : XM_001476212.1

name	Igfbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352345 GeneID:16006 MGI:96436
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like growth factor binding protein 1 transcript_id : NM_008341.3

name	Igfbp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111378399 GeneID:16009 MGI:96438
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like growth factor binding protein 3 transcript_id : NM_008343.2

name	Nudcd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424587 CCDS:CCDS24412.1 GeneID:209586 MGI:2144158
definition	codon_start : 1 product : NudC domain containing 3 protein_id : NP_776109.1

name	LOC100042173 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261635 GeneID:100042173
definition	codon_start : 1 product : similar to hCG1994130 protein_id : XP_001478693.1

name	Npc1l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402233 CCDS:CCDS24413.1 GeneID:237636 MGI:2685089
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008158 - hedgehog receptor activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0042632 - cholesterol homeostasis [Evidence IMP]; GO:0008203 - cholesterol metabolism [Evidence IEA]; GO:0030301 - cholesterol transport [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Niemann-Pick disease, type C1-like 1 product : NPC1-like 1 protein_id : NP_997125.1

name	LOC100041242 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261599 GeneID:100041242
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476081.1

name	Ddx56 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312650 CCDS:CCDS24414.1 GeneID:52513 MGI:1277172
definition	GO_component : GO:0005730 - nucleolus [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA] codon_start : 1 note : DEAD-box RNA helicase product : nucleolar RNA helicase homolog protein_id : NP_080814.1

name	Tmed4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527236 CCDS:CCDS24415.1 GeneID:103694 MGI:1915070
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : transmembrane emp24 protein transport domain containing 4 protein_id : NP_598781.1

name	LOC100042227 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261640 GeneID:100042227
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478727.1

name	Ogdh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861164 GeneID:18293 MGI:1098267
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016624 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor [Evidence IEA]; GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamin pyrophosphate binding [Evidence IEA] GO_process : GO:0006096 - glycolysis [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : alpha-ketoglutarate dehydrogenase product : oxoglutarate dehydrogenase (lipoamide) protein_id : NP_035086.2

name	Zmiz2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54607100 CCDS:CCDS24418.1 GeneID:52915 MGI:106374
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : zinc finger, MIZ-type containing 2 isoform 1 protein_id : NP_082877.2

name	Zmiz2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54607102 CCDS:CCDS24417.1 GeneID:52915 MGI:106374
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : zinc finger, MIZ-type containing 2 isoform 2 protein_id : NP_001005867.1

name	Ppia (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679439 CCDS:CCDS24419.1 GeneID:268373 MGI:97749
definition	GO_component : GO:0005829 - cytosol [Evidence IDA] GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0042277 - peptide binding [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence ISS]; GO:0046790 - virion binding [Evidence ISS] GO_process : GO:0006457 - protein folding [Evidence ISS] [Evidence IEA]; GO:0045069 - regulation of viral genome replication [Evidence ISS] codon_start : 1 note : cyclophilin A product : peptidylprolyl isomerase A protein_id : NP_032933.1

name	H2afv (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261601 GeneID:77605 MGI:1924855
definition	codon_start : 1 product : H2A histone family, member V protein_id : XP_001476118.1

name	LOC665283 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94389892 GeneID:665283
definition	codon_start : 1 product : similar to SMT3B protein protein_id : XP_980929.1

name	Purb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755252 CCDS:CCDS24420.1 GeneID:19291 MGI:1338779
definition	GO_component : GO:0005662 - DNA replication factor A complex [Evidence IDA]; GO:0000784 - nuclear chromosome, telomeric region [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IDA]; GO:0003691 - double-stranded telomeric DNA binding [Evidence ISS]; GO:0003729 - mRNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence ISS]; GO:0003697 - single-stranded DNA binding [Evidence ISS] [Evidence IDA]; GO:0046332 - SMAD binding [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0008134 - transcription factor binding [Evidence IPI] GO_process : GO:0006915 - apoptosis [Evidence NAS]; GO:0030154 - cell differentiation [Evidence NAS]; GO:0008283 - cell proliferation [Evidence NAS]; GO:0006270 - DNA replication initiation [Evidence ISS]; GO:0006268 - DNA unwinding during replication [Evidence ISS]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0045637 - regulation of myeloid cell differentiation [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : vascular actin single-stranded DNA-binding factor 2 p44 component; PurB beta; purine-rich single-stranded DNA-binding protein beta product : purine rich element binding protein B protein_id : NP_035351.1

name	Myo1g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30410767 CCDS:CCDS24421.1 GeneID:246177 MGI:1927091
definition	GO_component : GO:0016459 - myosin [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : myosin IG protein_id : NP_848534.1

name	LOC100041286 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261603 GeneID:100041286
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476151.1

name	Ccm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122481 CCDS:CCDS24422.1 GeneID:216527 MGI:2384924
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : cerebral cavernous malformation 2 homolog protein_id : NP_666126.1

name	AB182283 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126116574 GeneID:192950 MGI:3603030
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC192950 protein_id : NP_001075121.1

name	Tbrg4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20589521 CCDS:CCDS24423.1 GeneID:21379 MGI:1100868
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0004672 - protein kinase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : cell cycle progression 2 protein product : transforming growth factor beta regulated gene 4 protein_id : NP_598772.1

name	Wap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:93204854 CCDS:CCDS24424.1 GeneID:22373 MGI:98943
definition	GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA] codon_start : 1 product : whey acidic protein protein_id : NP_035839.3

name	Ramp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9507031 CCDS:CCDS24425.1 GeneID:56089 MGI:1860292
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015027 - coreceptor, soluble ligand activity [Evidence IDA]; GO:0008565 - protein transporter activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IPI]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0008277 - regulation of G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : receptor activity modifying protein 3 protein_id : NP_062384.1

name	LOC626419 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82933748 GeneID:626419
definition	codon_start : 1 product : hypothetical protein protein_id : XP_904455.1

name	Adcy1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61888832 CCDS:CCDS24426.1 GeneID:432530 MGI:99677
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0004016 - adenylate cyclase activity [Evidence TAS]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA] GO_process : GO:0007190 - adenylate cyclase activation [Evidence TAS]; GO:0006171 - cAMP biosynthesis [Evidence TAS]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA] codon_start : 1 note : barrelless product : adenylate cyclase 1 protein_id : NP_033752.1

name	LOC100041347 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261606 GeneID:100041347
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476262.1

name	Igfbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328135 CCDS:CCDS24427.1 GeneID:16006 MGI:96436
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0019838 - growth factor binding [Evidence IEA]; GO:0005520 - insulin-like growth factor binding [Evidence IEA] GO_process : GO:0001558 - regulation of cell growth [Evidence IEA] codon_start : 1 exception : mismatches in translation product : insulin-like growth factor binding protein 1 protein_id : NP_032367.2

name	Igfbp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111378400 CCDS:CCDS24428.1 GeneID:16009 MGI:96438
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS] [Evidence IEA] GO_function : GO:0019838 - growth factor binding [Evidence IEA]; GO:0005520 - insulin-like growth factor binding [Evidence IEA] [Evidence ISS]; GO:0046872 - metal ion binding [Evidence ISS]; GO:0008160 - protein tyrosine phosphatase activator activity [Evidence ISS] GO_process : GO:0009968 - negative regulation of signal transduction [Evidence ISS]; GO:0043065 - positive regulation of apoptosis [Evidence ISS]; GO:0045663 - positive regulation of myoblast differentiation [Evidence ISS]; GO:0001558 - regulation of cell growth [Evidence IEA] codon_start : 1 product : insulin-like growth factor binding protein 3 protein_id : NP_032369.2

name	LOC626342 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626342
definition	number : 1 pseudo : _no_value

name	LOC100041311 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041311
definition	number : 5 pseudo : _no_value

name	LOC100041311 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041311
definition	number : 4 pseudo : _no_value

name	LOC100041311 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041311
definition	number : 3 pseudo : _no_value

name	LOC100041311 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041311
definition	number : 2 pseudo : _no_value

name	LOC100041311 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041311
definition	number : 1 pseudo : _no_value

name	LOC665314 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665314
definition	number : 1 pseudo : _no_value

name	LOC100041332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041332
definition	number : 3 pseudo : _no_value

name	LOC100041332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041332
definition	number : 2 pseudo : _no_value

name	LOC100041332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041332
definition	number : 1 pseudo : _no_value

name	LOC665250 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261636 GeneID:665250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins product : similar to RNA polymerase II transcription factor SIII p18 subunit pseudo : _no_value transcript_id : XR_033814.1

name	LOC665277 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261642 GeneID:665277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 327 ESTs, 2 Proteins product : similar to ribosomal protein L36a pseudo : _no_value transcript_id : XR_033842.1

name	LOC665327 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261647 GeneID:665327
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 34 ESTs, 10 Proteins product : similar to hCG2016451 pseudo : _no_value transcript_id : XR_033883.1

name	LOC665339 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261648 GeneID:665339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 5 Proteins product : similar to RBBP5 protein pseudo : _no_value transcript_id : XR_033922.1

name	LOC665343 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261604 GeneID:665343
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 240 ESTs, 2 Proteins product : similar to HSP-90 pseudo : _no_value transcript_id : XR_032579.1

clone name	MSMg01-082P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508H16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-437H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509N06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-118O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548O22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-349D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075B14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-080F04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-537E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119B01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-444H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323P17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-388J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456E22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-426O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267O14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-263I18.T7 (MSMg01no263_i18.b1)	MSMg01-263I18.TJ (MSMg01no263_i18.g1)
ACC	AG405337	AG405338
length	767	760
length of high quality (start - end)	325 (43 - 367)	555 (76 - 630)
definition	CHROMAT_FILE: MSMg01no263_i18.b1 PHD_FILE: MSMg01no263_i18.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:00:29 2005	CHROMAT_FILE: MSMg01no263_i18.g1 PHD_FILE: MSMg01no263_i18.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:00:29 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT TCACTCTGAGTACCAAACTGGCCTCGAACTCAGAGATCCACCTCCCTCTG CCTCCCAAGTGTTGGGGTTAACGGTGTGCTCTGCCCAGCAACCAACAATA TTTTCAATGAATCAGTAGATACAATTATTGTGAGCAACAATTCTGATACT TATGTTGATTTGTACTGATGCACTTTGTTTGTTTGTTTACCAGTAAACAA TCTGAGGCAAAGTCCCACCTTGCTGGACATGGACTGTTGCCTGCGGATCG GTCTTGGCACAGACTGAATTCCCAGCAGTAGAACTAAGTCAGACCGTGTT GTGTTGTGCTTCTTACTTTAGCTCACAGCTTCTTGGCCATGCTTTCTGGC ACAGGCATGACACCCCCGGGGACAGTAGTGAAGACAGCACAACACTTAAG GTCCTTCTCCTGGGATTCTAAAATGCTGTGACTCATAGTTTCCGGTTGGC ATAGGTTTGTGCCAGGGCTATGTGTGGTCAAATGATTTCTGATTATCTCA CAGTGTTCCCCACCTTTTAAAATGATGTCACTCTTCATACCGTGCTATAT GTGATATATATGCTTGAGATCTTTTTTTATAATTTACCTTTACTTTAATT TTCCTTCATTTCTTAATCTTCTCTTTCCCTACCTTCCTTTTATTTTTCTC ATCTCATATGCTATATAATATTTAAATTAATAAAATCATTCTATTATCTT CATTACAACTTAATCTG	CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXCAGGAAAACACAATAAAACAAATGA AGGAATTTTTAAAAACCATTCAGGATCTAAAAATGGAAGTAGAAACAATA AAGAAATCACAAAGGGAGACAAATCTGGAGATAAAAATCCTAGGAAAGAA ATCACGAACCATAGATGAAAGCATCAGCAACAGAATAAAAGAAATAGAAG AGAGAATCTCAGGTGCAGAAGATTCCATAGAAATATAGACACATCAATCA AAGAAAATGCAAAGGATCCTAACTCAAAACATCCAGGAAATCTAGGACAC AATGAGAAGACCAAAGGATAATAGGAGTAGATGAGAATGAAGATTTTCAA CTTGAAGGGCCAGTAAATATCCACAAAATTATAAATGAAAACTTCCCTAC CATAAAGAAAGAGATGCCCATGAACATACAAGAAGTTTACAGAACTGCAA ATAGGTTGGACCAGAAAAGAAATTCCCCTTGAAACACAATCAAAACACCA AATGCACTAAACAAAGATAGAATATTAAAACTAGTAAGGGAAAACGGTAA AGTAACATATAAAGGCAGACCTATTAGAATTACACCAGACTTCTCACCAG AGACTATGAAAGCTAGAAGATCCTGAACAGACGTTAAGCAGACCCTAAGA AAACACAAATGTCAGTCCAGTCTACTAATACCCAGTAAAACTCTCAATTA TCATAAATGG
quality values	Open. Hide. 14 14 19 23 44 44 41 37 37 37 32 32 32 32 33 33 33 37 41 44 44 59 30 30 31 31 30 23 25 10 10 10 10 10 9 11 12 9 9 10 22 23 31 48 48 48 36 36 36 33 44 33 33 33 33 36 27 22 10 10 10 10 8 8 7 7 8 8 13 13 23 32 34 43 47 50 50 53 36 36 36 36 36 36 43 53 53 53 53 57 50 53 57 59 59 59 59 59 59 59 59 59 59 50 50 50 50 50 38 59 43 39 37 37 30 30 24 20 17 10 10 10 10 9 11 22 28 41 50 59 59 59 59 53 53 53 53 53 53 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 47 47 47 50 50 50 68 68 50 50 48 54 54 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 68 68 68 68 68 68 68 57 57 57 57 57 59 57 68 68 68 68 68 59 59 57 52 52 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 57 47 46 46 48 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 57 57 68 68 44 44 28 28 23 21 14 19 19 41 32 59 57 54 54 59 59 59 59 54 54 54 54 54 50 50 57 57 57 57 57 57 48 48 48 48 43 43 47 43 48 29 29 28 24 24 25 18 18 24 23 23 10 10 9 10 10 11 12 11 11 11 11 13 21 28 27 39 35 35 35 39 47 57 57 59 59 59 59 43 37 22 22 17 22 24 30 28 30 28 28 34 21 18 13 10 9 9 11 14 9 11 11 12 19 22 24 18 20 11 11 11 11 11 15 15 15 22 22 28 37 34 37 28 28 28 37 37 43 39 39 35 34 36 33 33 43 43 57 57 48 54 42 43 40 48 48 43 43 43 48 48 48 57 57 42 47 47 47 47 47 48 57 48 43 43 32 28 23 14 14 24 30 39 46 39 37 30 24 19 13 13 12 19 19 13 13 15 26 28 34 30 30 30 28 28 20 20 20 21 21 15 21 23 29 29 26 26 17 15 15 16 16 18 28 29 30 29 33 28 25 25 33 36 39 48 36 26 26 11 11 11 21 21 28 28 14 10 9 9 10 15 19 22 23 23 28 34 28 22 13 13 12 16 15 15 8 8 8 12 15 23 19 12 12 12 16 19 11 11 11 18 11 8 8 8 8 15 12 17 22 22 28 28 22 28 28 28 32 28 28 19 12 8 8 8 8 8 8 8 8 11 13 24 16 11 10 10 10 8 8 9 9 10 10 10 16 8 8 8 8 9 9 11 11 11 11 12 15 12 12 12 17 13 10 9 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 12 10 9 11 11 19 19 19 19 13 10 11 10 10 9 8 10 8 6 8 8 10 10 10 15 15 15 13 10 8 9 8 8 8 8 8 10 10 8 10 8 9 9 9 8 8 8 8 10 10 10 10 11 11 9 9 9 9 9 9 10 10 10 10 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 6 8 6 6	Open. Hide. 10 15 17 13 8 8 8 8 17 27 39 39 39 41 41 41 41 39 44 50 53 53 53 33 33 33 37 37 33 29 23 13 9 6 6 8 8 6 6 9 14 15 15 21 25 30 41 37 41 47 47 47 53 41 50 50 50 47 43 33 21 10 12 10 13 15 12 12 11 10 15 17 21 25 28 30 29 36 36 57 50 42 57 57 53 50 50 57 57 59 59 50 50 50 50 47 47 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 48 48 42 37 32 25 15 15 15 15 19 15 24 35 43 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 68 68 68 68 50 48 46 46 46 48 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 51 50 50 50 51 51 51 51 51 51 51 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 35 43 23 20 20 23 35 39 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 44 43 35 27 43 24 20 16 18 22 22 42 44 43 43 35 35 35 43 43 35 35 43 43 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 47 43 38 19 9 9 9 9 17 23 43 44 59 59 68 68 59 59 54 52 50 59 59 59 68 68 68 68 68 59 59 59 57 57 59 59 59 57 57 57 59 59 68 68 68 68 57 57 57 57 57 57 59 57 44 57 43 44 44 48 47 46 43 57 57 57 57 57 57 57 68 57 57 57 57 54 54 54 57 57 57 59 48 48 48 57 57 57 59 59 59 44 44 43 43 43 43 39 32 37 30 35 35 39 37 47 41 37 37 46 46 43 44 39 39 25 25 30 37 37 41 41 34 37 28 28 28 37 41 43 43 39 35 35 35 35 43 40 35 35 32 39 43 43 57 57 57 57 57 57 57 57 57 54 54 54 54 54 50 48 43 43 43 43 48 37 40 20 28 20 24 24 28 28 30 37 37 48 42 26 19 13 8 8 11 14 28 28 43 43 43 43 59 43 39 32 28 23 23 23 23 23 28 34 37 33 33 28 28 23 23 13 17 21 30 22 17 17 17 19 19 28 31 24 20 20 24 24 28 28 24 24 28 20 19 19 19 20 24 28 30 37 30 22 18 14 13 18 15 11 11 11 11 11 16 22 27 30 22 14 11 12 12 16 16 24 25 19 12 15 12 12 15 12 14 14 20 22 29 30 22 17 21 12 14 14 12 11 11 11 12 21 22 18 18 13 11 18 21 37 37 23 23 12 11 11 11 11 12 12 12 12 12 11 11 12 23 26 24 14 14 15 24 27 30 12 21 11 11 11 11 17 17 9 9 9 9 13 24 20 17 14 17 17

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no263_i18.b1 MSMg01no263_i18.b1 CHROMAT_FILE:
MSMg01no263_i18.b1 PHD_FILE: MSMg01no263_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:29 2005
         (325 letters)



>mm_chr11_7053263_7053988
          Length = 726

 Score =  534 bits (276), Expect = e-156
 Identities = 313/328 (95%), Gaps = 6/328 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcactctgagtaccaaactggcctcgaactcagagatccacctccctctgcctcc 63
           ||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactctgaggaccaggctggcctcgaactcagagatccacctccctctgcctcc 263

                                                                       
Query: 64  caagtgttggggttaacggtgtgctctgcccagcaaccaacaatattttcaatgaat-ca 122
           |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 264 caagtgttggggttaaaggtgtgctctgcccagcaaccaacattattttcaatgaattca 323

                                                                       
Query: 123 gtagatacaattattgtgagcaacaattctgatacttatgttgatttgtactgatgcact 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtagatacaattattgtgagcaacaattctgatacttatgttgatttgtactgatgcact 383

                                                                       
Query: 183 ttgtttgtttgtttaccagtaaacaatctgaggcaaagtcccaccttgctggacatggac 242
           | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 384 tagtttgtttgtttaccagtaaaaaatctgaggcaaagtcccaccttgctggacatggac 443

                                                                       
Query: 243 tgttgcctgcggatcggtcttggcacagactgaattcccagcagtagaactaagtcagac 302
           |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 444 tgttgcctgcggatcggtctcggcacagactgaattcccatcagtagaactaagtcagac 503

                                       
Query: 303 cgtgttgtgttgtg-----cttcttact 325
           ||||||||||||||     |||||||||
Sbjct: 504 cgtgttgtgttgtgttgtgcttcttact 531


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 726
Length adjustment: 9
Effective length of query: 316
Effective length of database: 717
Effective search space:   226572
Effective search space used:   226572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information