Query= MSMg01no265_h23.b1 MSMg01no265_h23.b1 CHROMAT_FILE:
MSMg01no265_h23.b1 PHD_FILE: MSMg01no265_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:59 2005
(319 letters)
>mm_chr11_21992540_21993258
Length = 719
Score = 607 bits (314), Expect = e-178
Identities = 314/314 (100%)
Strand = Plus / Plus
Query: 5 gaattcatgttcttagattatttctaattttaaggattgatcaatttctatctttaaaca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgttcttagattatttctaattttaaggattgatcaatttctatctttaaaca 264
Query: 65 tatttgcttcaaatatgatttataagaaaagtctgtgttggatagaactaaggttcatca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatttgcttcaaatatgatttataagaaaagtctgtgttggatagaactaaggttcatca 324
Query: 125 aattatgcaattgtcattcggcacataaggactggcattttccatttcattaagaaaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aattatgcaattgtcattcggcacataaggactggcattttccatttcattaagaaaaaa 384
Query: 185 ccagcagaggacctgcaagatggctcattaataaaatcacctgcttttaagtccgatgac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccagcagaggacctgcaagatggctcattaataaaatcacctgcttttaagtccgatgac 444
Query: 245 ctgaattcgatcctgaagccctcactggagagaactaattcctgaaagttgtctgtgcac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgaattcgatcctgaagccctcactggagagaactaattcctgaaagttgtctgtgcac 504
Query: 305 gtgcatatgagtga 318
||||||||||||||
Sbjct: 505 gtgcatatgagtga 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_h23.g1 MSMg01no265_h23.g1 CHROMAT_FILE:
MSMg01no265_h23.g1 PHD_FILE: MSMg01no265_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:00 2005
(267 letters)
>mm_chr11_22144044_22144711
Length = 668
Score = 480 bits (248), Expect = e-140
Identities = 260/268 (97%), Gaps = 8/268 (2%)
Strand = Plus / Minus
Query: 1 tcaggtctacactcttgcatggcatgcatgttacctatctccctaccccctcagtgaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tcaggtctacactcttgcatggcatgcatgttacctatctccctaccccctcagtgaaac 334
Query: 61 attttaattctgtagaataagtaccagtcttttaggtgagcatgacttgaaacaattaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 attttaattctgtagaataagtaccagtcttttaggtgagcatgacttgaaacaattaga 274
Query: 121 aaaaaatcagtgca-tttgtcgagttatagtatttgttcaaatttcatttctgttactgt 179
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aaaaaatcagtgcattttgtcgagttatagtatttgttcaaatttcatttctgttactgt 214
Query: 180 cataaaatattctgaaaggttttagtttatagttccaagttagagtccagcactgagggc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 cataaaatattctgaaaggttttagtttatagttccaagttagagtccagcactga---- 158
Query: 240 ggggggggggggggtgatccaggcagaa 267
|||||||||||||||||||||||||
Sbjct: 157 ---gggggggggggtgatccaggcagaa 133
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 668
Length adjustment: 9
Effective length of query: 258
Effective length of database: 659
Effective search space: 170022
Effective search space used: 170022
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
