Query= MSMg01no268_n10.b1 MSMg01no268_n10.b1 CHROMAT_FILE:
MSMg01no268_n10.b1 PHD_FILE: MSMg01no268_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:11 2005
(234 letters)
>mm_chr11_46980424_46981058
Length = 635
Score = 412 bits (213), Expect = e-120
Identities = 226/231 (97%), Gaps = 3/231 (1%)
Strand = Plus / Minus
Query: 1 tgaccttgagtcaaattcagtctatagcctatttatatc--gttttattaaaacatagtc 58
|||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||
Sbjct: 430 tgaccttgagtcaaattcagcctatagcccatttatatcaagttttattaaaacatagtc 371
Query: 59 ataactagtcatatatgcctttaaaaacattcaaaatggattgtttctgatatagaaata 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ataactagtcatatatgcctttaaaaacattcaaaatggattgtttctgatatagaaata 311
Query: 119 ctttatagactattcactgactctttacagataaaattggcctatgcttatcctagaact 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctttatagactattcactgactctttacagataaaattggcctatgcttatcctagaact 251
Query: 179 gttagaagaaatttttgtactgtctcataatcaacatgactttcaaatgta 229
|||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gttagaagaa-tttttgtactgtctcataatcaacatgactttcaaatgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 635
Length adjustment: 9
Effective length of query: 225
Effective length of database: 626
Effective search space: 140850
Effective search space used: 140850
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no268_n10.g1 MSMg01no268_n10.g1 CHROMAT_FILE:
MSMg01no268_n10.g1 PHD_FILE: MSMg01no268_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:11 2005
(285 letters)
>mm_chr11_46822228_46822912
Length = 685
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Plus
Query: 1 accacggaaagttttgagcctagagcccagcattcatactaaaccctagcagagtagtgg 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accacggaaaattttgagcctagagcccagcattcatactaaaccctagcagagtagtgg 260
Query: 61 ctgtatagattttatgacaacattgtcatcagggctctgattatagttgtgacaagagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtatagattttatgacaacattgtcatcagggctctgattatagttgtgacaagagaa 320
Query: 121 aggttattaatgtgtgagtattcatagcttacccccacaaccccataactgccagaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggttattaatgtgtgagtattcatagcttacccccacaaccccataactgccagaaata 380
Query: 181 aacctggcctcagctgctcagactctcttctctgtcttgttccttcctttaaagaatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacctggcctcagctgctcagactctcttctctgtcttgttccttcctttaaagaatttg 440
Query: 241 aacttttctttctctttttaggttaatattagctaataaaatatt 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacttttctttctctttttaggttaatattagctaataaaatatt 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
