Query= MSMg01no274_o17.b1 MSMg01no274_o17.b1 CHROMAT_FILE:
MSMg01no274_o17.b1 PHD_FILE: MSMg01no274_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:33 2005
(573 letters)
>mm_chr11_90880261_90881230
Length = 970
Score = 998 bits (516), Expect = 0.0
Identities = 556/572 (97%), Gaps = 7/572 (1%)
Strand = Plus / Minus
Query: 1 tggtgatcccaaggatgagaggtaggaggaactgaaagatgctggggaaactataacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 tggtgatcccaaggatgagaggtaggaggaactgaaagatgctggggaaactataacaga 708
Query: 61 ctatgtaatctgatgagtgagtcctatggacagtactgatgatgggggtgttggttttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ctatgtaatctgatgagtgagtcctatggacagtactgatgatgggggtgttggttttat 648
Query: 121 tatcactgtcatggggtaatcaaatagaacaaatatattgtagacattggaagtatttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tatcactgtcatggggtaatcaaatagaacaaatatattgtagacattggaagtatttaa 588
Query: 181 cctttgtcaactaaatgttctatca-ttacaaatttattataactccttgtgtccatcag 239
||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 587 cctttgtcaacaaaatgttctatcatttacaaatttattataactctttgtgtccatcag 528
Query: 240 catagtttcctatttcgtgcttacttttctatcctgtctcactcattagcatcctttagt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 catagtttcctatttcgtgcttacttttctatcctgtctcactcattagcatcctttagt 468
Query: 300 ttatgcaatttctttggcgatcaatgtatatcaggaataaataaggggagctctctcttg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ttatgcaatttctttggcgatcaatgtatatcaggaataaataaggggagctctctcttg 408
Query: 360 cttcggggaatgtgctaagaattttccatttctctctctgagtctctcaccctccttttc 419
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 407 cttcagggaatgtgctaagaattttccatttctctctctgagtctctcacccttcttttc 348
Query: 420 ttcatgtcttggtaaaagttaatttccaaacaatactttatcaatcaaacttcattctgt 479
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 347 ttcatgtcttggtaaaagttaatttccaaacaagactttatcaatcaaacttcattctgt 288
Query: 480 gcacacaccttgtgtgtgtgtgtgtgtggggggg-acttatcatatctaacacagctcat 538
|||||||||||||||||||| | ||||||| |||||||||||||| ||||| ||||
Sbjct: 287 gcacacaccttgtgtgtgtg-----gggggggggaacttatcatatctagcacagttcat 233
Query: 539 cttgtgtcttcgtctccctttaagctccatga 570
||||||||||| ||||||||||||||||||||
Sbjct: 232 cttgtgtcttcatctccctttaagctccatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 970
Length adjustment: 10
Effective length of query: 563
Effective length of database: 960
Effective search space: 540480
Effective search space used: 540480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_o17.g1 MSMg01no274_o17.g1 CHROMAT_FILE:
MSMg01no274_o17.g1 PHD_FILE: MSMg01no274_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:33 2005
(612 letters)
>mm_chr11_90679109_90680114
Length = 1006
Score = 1073 bits (555), Expect = 0.0
Identities = 596/613 (97%), Gaps = 8/613 (1%)
Strand = Plus / Plus
Query: 1 tccccatgtcatttagctaatagcagcagaatcaggatgtaatccagtcctgattcaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccccatgtcatttagctaatagcagcagaatcaggatgtaatccagtcctgattcaata 260
Query: 61 atccatgacctgtgcatagtagccagtctgttaagcttgcagtggtaggctctcaagcct 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atccatgacctgtgcgtagtagccagtctgttaagcttgcagtggtaggctctcaagcct 320
Query: 121 atatgattcataaatggtacaattttgctttcacattcccatgctccctgtctgtatctc 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatgattcataaatgatacaattttgctttcacattcccatgctccctgtctgtatctc 380
Query: 181 actagtttctaggtattaattatgctttccaggttccaacagtaacatcagtgtccttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actagtttctaggtattaattatgctttccaggttccaacagtaacatcagtgtccttgg 440
Query: 241 agacttaacatgagtgtcattaagatcaaattcagtatatgctcgttagagaaaggaatc 300
||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| |||
Sbjct: 441 agacttaacataagtgtcattaagatcaaattcagtatatgctcatcagagaaagggatc 500
Query: 301 ctccttagtcgatggttcccactcgtccatcttcctgaggacttgtcttatcatctgtat 360
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 501 ctccttagtcgatggttcccactcgtccgtcttcctgaggactt-----atcatctgtat 555
Query: 361 attttgagtgagtttatttaaggaataatttttttttttagaccaggcaacgttcccttc 420
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 556 attttgagtgagtttatttaaggaataattttttttt--agaccaggcaacgttcccttc 613
Query: 421 acatcaatgacctgaaaattctgaactgtttctgctttcacaacatgtgggaggaggagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 acatcaatgacctgaaaattctgaactgtttctgctttcacaacatgtgggaggaggagg 673
Query: 481 gagaggagagtttagagg-aaacatgaactgtaataaaagtaaatagaaaatgataaact 539
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gagaggagagtttaaagggaaacatgaactgtaataaaagtaaatagaaaatgataaact 733
Query: 540 gattgggacacagttccatcagagatggtgaggccattccacttacctgctttggtgaca 599
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ggttgggacacagttccatcagagatggtgaggccattccacttacctgctttggtgaca 793
Query: 600 aaatctgtgacta 612
|||||||||||||
Sbjct: 794 aaatctgtgacta 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1006
Length adjustment: 10
Effective length of query: 602
Effective length of database: 996
Effective search space: 599592
Effective search space used: 599592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
