Query= MSMg01no277_c19.b1 MSMg01no277_c19.b1 CHROMAT_FILE:
MSMg01no277_c19.b1 PHD_FILE: MSMg01no277_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:16 2005
(324 letters)
>mm_chr11_84235005_84235727
Length = 723
Score = 586 bits (303), Expect = e-172
Identities = 315/319 (98%), Gaps = 1/319 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagttcatcctcaagccaagaagagacgctgtcctcggtgacagcacggataaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 626 ggaattcagttcatcctcaagccaagaagagacgctgtcctcggtgacagcacagataaa 567
Query: 64 cccagaggactgcgtgctgagagaagccaggaacagaaagacaaaaatctcttgcgtggc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cccagaggactgcgtgctgagagaagccaggaacagaaagacaaaaatctcttgcgtggc 507
Query: 124 taccagcccctgggaggggatggccttggggtgtagagagttgtctaggctggaggagtg 183
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 506 taccagcccctgggaggggatggccttggggtgtagagagttgtctaggatggaggagtg 447
Query: 184 agctttgcggaccagagtaatgaagggaataaattccagaagtctcaccataaaaaaaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 446 agctttgcggaccagagtaatgaagggaataaattccagaagtctcaccat-aaaaaaaa 388
Query: 244 tgagcagcgtggtactggatctgttaaaaggctccattcagccacttcatgctgtgcaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgagcagcgtggtactggatctgttaaaaggctccattcagccacttcatgctgtgcaca 328
Query: 304 tctagaatgctgcccttta 322
||||||||| |||||||||
Sbjct: 327 tctagaatgttgcccttta 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 723
Length adjustment: 9
Effective length of query: 315
Effective length of database: 714
Effective search space: 224910
Effective search space used: 224910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no277_c19.g1 MSMg01no277_c19.g1 CHROMAT_FILE:
MSMg01no277_c19.g1 PHD_FILE: MSMg01no277_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:16 2005
(369 letters)
>mm_chr11_84080832_84081602
Length = 771
Score = 636 bits (329), Expect = 0.0
Identities = 364/379 (96%), Gaps = 10/379 (2%)
Strand = Plus / Plus
Query: 1 ggtgattatga-tggagagacggttcaacagtaatagcacttactgcaaagtcacagccg 59
||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 201 ggtgattatgactggagagacggttcaacagtcatagcacttactgcagagtcacagccg 260
Query: 60 cctgcaactctagttctagagggttccacacctctcctctccacgctgagcttctgcata 119
|||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||
Sbjct: 261 cctgcaactctagttctagagggtccctcgcctctcctctccacgctgagcttctgcata 320
Query: 120 catgtggcgcataagtacatacaataaaattaaattagtcttcttttt-cccctggcttt 178
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 catgtggcgcataagtacatacaataaaattaaattagtcttcttttttcccctggcttt 380
Query: 179 tcaagacagggtttttctgtgtagccctgactgtcttggaaccggctctcttgaattcac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaagacagggtttttctgtgtagccctgactgtcttggaaccggctctcttgaattcac 440
Query: 239 agaaatctgcctgcctcttccttccaagtgcaaacgccaccactgcctggctaaagtaat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaatctgcctgcctcttccttccaagtgcaaacgccaccactgcctggctaaagtaat 500
Query: 299 aatcttttaaagtt--ctctctct--ctctctctctctctct----aaactgagtttgat 350
|||||||||||||| |||||||| |||||||||||||||| ||||||||||||||
Sbjct: 501 aatcttttaaagttttctctctcttcctctctctctctctctctttaaactgagtttgat 560
Query: 351 agtgcatacttgtaatttc 369
|||||||||||||||||||
Sbjct: 561 agtgcatacttgtaatttc 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 771
Length adjustment: 9
Effective length of query: 360
Effective length of database: 762
Effective search space: 274320
Effective search space used: 274320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
