GCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTACGTGTTTTGCTTAGACTCTTAGACTGCAAATAATTCAATGC
CAATGATCTGCCAAGTTAGGTTTAACCTCCATGAAGTTCTGAATCCTCTT
CTGGGAGTCCTTGTTTGTACTCCAAAGAATTTGGGTTACGTATTTACACC
AAGTTTTCTTATTCTATCAAGCACATAGAGTGTGCTCCATAAACATGTGA
GGAATTTAGCTGGTTACTGGTTTCTTTTAAAATAGACAGAAAAGTAATCA
CGGTACTTGACACATGCTTCAAGGTTCCTTCTGCAATATCAGCTTCATAA
ACAAAAGTGATGGTTGAAATAATAACATTCCCCACCCCTGTGCTTAAATC
TAAGCGATCCACCTGAACCTCAGCATCTCCCCAAGGATATCATGACAGGT
AACAGCTGTTAACCCTTTAACACATTGGAAGCCTCCCACAAATGTTCATG
TGTCCTGGAAAACTTGACTTTTGACCAAAATCATAAAGATGAGCTTTCAA
AGGAGAAGCTGATGAACATCACTGANATATGCATGCACTGATTTCTGGGG
TCAAGCATTTGACCTGTCACAGTGTTAGGAAAACCTGGCCCAGTGAAGCC
CCAGTGGAGCAGCCCTGTGCTGTTCAGCATTGTCCTTATTGGAGAGGGCA
CTGATGCTCAAATGTG

ACGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGAGATCCTTGGAATTGAAATGCA
TATCGTTTCATTAGCTACATCTTCACCCGAGGGGAAAAAAAAGGAGCGAA
AGAAACTTCCTTGAGACAATTTCCCCAAATGGAGTATGTACTAATGAGTA
GTTCACTTATCTTCACATGGCACACAGAGGGAAAAGAAAGAGGACAAATA
AAACCATTCCAATGGTCGTATTAAATCACATCATATGTGTCCAGAAATGA
GGGTGGGCTGGAATTTAGGAGAAAAACTTACTATGTACATAAATCCTCTA
GCATACATATCTTGGTTGGTATGTTGCCCCCCCCCCACAGAGAAAAAAAA
AACAGGAATTCTATTTTAAGAATTAAATATGTGAAAAAATTTCTTGTTCA
GATTGGCTCAAAATACCATACAGGGCTGCATTAATGAAGATTAAGTATAT
TTAGATAGAATAATTCAAAAGACCTTATCAATTTGGCACCATTTCCTTCC
AAATTGAAAAAAAAACTTAATTTAACTGGCTATAGATGAATTCCTAGATT
TATTGAAATAGTTTTGAGTTGAATACACTGAGTGGGAGTCACAAATCATT
CGTTGCTGGTTTGGATTCTCTAGCTTGAATTGAACCCAAATAATGCAAGC
TCTCAATTTAGTGTGG

Query= MSMg01no277_d15.b1 MSMg01no277_d15.b1 CHROMAT_FILE:
MSMg01no277_d15.b1 PHD_FILE: MSMg01no277_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:19 2005
         (320 letters)



>mm_chr11_36430910_36431629
          Length = 720

 Score =  582 bits (301), Expect = e-171
 Identities = 313/317 (98%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctacgtgttttgcttagactcttagactgcaaataattcaatgccaatgatctg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggaattctacgtgttttgcttagactcttagactgcaaataattcaatgccaatgatctg 461

                                                                       
Query: 64  ccaagttaggtttaacctccatgaagttctgaatcctcttctgggagtccttgtttgtac 123
           ||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ccaagttagggaaaacatccatgaagttctgaatcctcttctgggagtccttgtttgtac 401

                                                                       
Query: 124 tccaaagaatttgggttacgtatttacaccaagttttcttattctatcaagcacatagag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tccaaagaatttgggttacgtatttacaccaagttttcttattctatcaagcacatagag 341

                                                                       
Query: 184 tgtgctccataaacatgtgaggaatttagctggttactggtttcttttaaaatagacaga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgtgctccataaacatgtgaggaatttagctggttactggtttcttttaaaatagacaga 281

                                                                       
Query: 244 aaagtaatcacggtacttgacacatgcttcaaggttccttctgcaatatcagcttcataa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aaagtaatcacggtacttgacacatgcttcaaggttccttctgcaatatcagcttcataa 221

                            
Query: 304 acaaaagtgatggttga 320
           |||||||||||||||||
Sbjct: 220 acaaaagtgatggttga 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space:   221121
Effective search space used:   221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no277_d15.g1 MSMg01no277_d15.g1 CHROMAT_FILE:
MSMg01no277_d15.g1 PHD_FILE: MSMg01no277_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:19 2005
         (273 letters)



>mm_chr11_36279843_36280515
          Length = 673

 Score =  528 bits (273), Expect = e-154
 Identities = 273/273 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcttgttcagattggctcaaaataccatacagggctgcattaatgaagattaagtatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcttgttcagattggctcaaaataccatacagggctgcattaatgaagattaagtatat 260

                                                                       
Query: 61  ttagatagaataattcaaaagaccttatcaatttggcaccatttccttccaaattgaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagatagaataattcaaaagaccttatcaatttggcaccatttccttccaaattgaaaa 320

                                                                       
Query: 121 aaaaacttaatttaactggctatagatgaattcctagatttattgaaatagttttgagtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaacttaatttaactggctatagatgaattcctagatttattgaaatagttttgagtt 380

                                                                       
Query: 181 gaatacactgagtgggagtcacaaatcattcgttgctggtttggattctctagcttgaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatacactgagtgggagtcacaaatcattcgttgctggtttggattctctagcttgaat 440

                                            
Query: 241 tgaacccaaataatgcaagctctcaatttagtg 273
           |||||||||||||||||||||||||||||||||
Sbjct: 441 tgaacccaaataatgcaagctctcaatttagtg 473


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space:   175296
Effective search space used:   175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)