Query= MSMg01no277_j17.b1 MSMg01no277_j17.b1 CHROMAT_FILE:
MSMg01no277_j17.b1 PHD_FILE: MSMg01no277_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:46 2005
(320 letters)
>mm_chr11_116001299_116002018
Length = 720
Score = 383 bits (198), Expect = e-111
Identities = 216/222 (97%), Gaps = 1/222 (0%)
Strand = Plus / Minus
Query: 8 ttccaggacagccaagctacacagagaaaccctgtctcaaacaccaatttgaggctgtga 67
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 469 ttccaggacagccaagctacacagag-aaccctgtctcaaacaccaatttgaggctgtga 411
Query: 68 gtaacattctacctgagagggggcaagagtgagtatgtcagaagactgcctgctggggaa 127
|||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 410 gtaacaatctagatgagagggggcaagagtgagtgtgtcagaagactgcctgctggggaa 351
Query: 128 ggagtagagggcagaactgcacctggtggcatgaggggcactggaagtgctcccagggac 187
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ggagcagagggcagaactgcacctggtggcatgaggggcactggaagtgctcccagggac 291
Query: 188 cttgacatgtgtcaggaagatgtgaagaagaattcaaatctc 229
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cttgacatgtgtcaggaagatgtgaagaagaattcaaatctc 249
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no277_j17.g1 MSMg01no277_j17.g1 CHROMAT_FILE:
MSMg01no277_j17.g1 PHD_FILE: MSMg01no277_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:46 2005
(288 letters)
>mm_chr11_115793782_115794469
Length = 688
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Plus
Query: 1 caaaccagtggttttcaaagatttccaaagggtgaggaggtaagaagttaagagggtgtt 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 caaaccagtggttttcaaagatttccaaagggtgaggaggtaggaagttaagagggtgtt 260
Query: 61 gtgccacagagctactacggtaccgccagcagtctgcaaaacaggtagcttggtatgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgccacagagctactacggtaccgccagcagtctgcaaaacaggtagcttggtatgtta 320
Query: 121 cctttcactacagccatggtcgcactctcttgtaaaggtgttttaaaagaatcaaaccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctttcactacagccatggtcgcactctcttgtaaaggtgttttaaaagaatcaaaccca 380
Query: 181 aagactttcttcagggtgctccggactcgccgctcccggtcgaagggagtggagaaagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagactttcttcagggtgctccggactcgccgctcccggtcgaagggagtggagaaagga 440
Query: 241 cgggcgctcatctttgcaaaaagcagcagccaaaaggttaacgca 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgggcgctcatctttgcaaaaagcagcagccaaaaggttaacgca 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
