Query= MSMg01no279_d11.b1 MSMg01no279_d11.b1 CHROMAT_FILE:
MSMg01no279_d11.b1 PHD_FILE: MSMg01no279_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:45 2005
(308 letters)
>mm_chr11_4041404_4042110
Length = 707
Score = 526 bits (272), Expect = e-154
Identities = 299/308 (97%), Gaps = 1/308 (0%)
Strand = Plus / Minus
Query: 1 ggcaagtgctctaccagctccccatgccccagtccttgcctctctcatctgaacgtcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 418 ggcaagtgctctaccagctccccatgccccagtccttgcctctctcatctgaaggtcact 359
Query: 61 ttacataacctgttcacaggggctaaaatgtcttagagtcaatatttttaaagattatac 120
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 358 ttacataacctgttcacaggggctaaaatgtcttagagtcaata-ttttaaagattatgc 300
Query: 121 aaagtatgtttgtgcagcccaggagtgcaaggccttgaggaatttaagaattctacctgt 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aaggtatgtttgtgcagcccaggagtgcaaggccttgaggaatttaagaattctacctgt 240
Query: 181 tcccagcaagagaaaccaaggtgactggtattttgtttgtttttctttttgagagtagac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 239 tcccagcaagagaaaccaaggtgactggtattttgtttgtttttctttttgagagtagcc 180
Query: 241 caggctgacttcttactccctgtgcagccaaggatgatcaggagttcgtgaccctctggt 300
|||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 179 caggctgacttcaaactccctgtgcagccaaggatgatcaggagttcatgatcctctggt 120
Query: 301 ttcccttc 308
||||||||
Sbjct: 119 ttcccttc 112
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 707
Length adjustment: 9
Effective length of query: 299
Effective length of database: 698
Effective search space: 208702
Effective search space used: 208702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_d11.g1 MSMg01no279_d11.g1 CHROMAT_FILE:
MSMg01no279_d11.g1 PHD_FILE: MSMg01no279_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:46 2005
(287 letters)
>mm_chr11_3857925_3858611
Length = 687
Score = 545 bits (282), Expect = e-160
Identities = 285/286 (99%)
Strand = Plus / Plus
Query: 1 agcagtggactctaggcaaggttcttggggcacagctcttttgtatttctcaccagcaga 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 agcagtggactctaggcaaggttcttggggcacagctcttttgtatttcttaccagcaga 260
Query: 61 gtggtcttggataagacccttcacttctctacgttcccctaattgcaaaatgtccaactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggtcttggataagacccttcacttctctacgttcccctaattgcaaaatgtccaactc 320
Query: 121 tgatgactctatttgtgaggagcgggtgtggcagcagtcccaagaaggtgccagggactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatgactctatttgtgaggagcgggtgtggcagcagtcccaagaaggtgccagggactg 380
Query: 181 cagctaagtcttttgacttgcacctgacttcctcatacacctgaaaataagccacgaccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagctaagtcttttgacttgcacctgacttcctcatacacctgaaaataagccacgaccg 440
Query: 241 tcgtgagagctgcacaggtgcaccatgatgctggcggtttaaacaa 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcgtgagagctgcacaggtgcaccatgatgctggcggtttaaacaa 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
