Query= MSMg01no280_d24.b1 MSMg01no280_d24.b1 CHROMAT_FILE:
MSMg01no280_d24.b1 PHD_FILE: MSMg01no280_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:03 2005
(237 letters)
>mm_chr11_49011879_49012514
Length = 636
Score = 433 bits (224), Expect = e-126
Identities = 230/232 (99%), Gaps = 1/232 (0%)
Strand = Plus / Minus
Query: 1 agataaactggttattaagttatacaagcctaaggtataaggactaagctttcataaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agataaactggttattaagttatacaagcctaaggtataaggactaagctttcataaata 372
Query: 61 ataaaagtctccacgtcattgttagaggctgccaggtcgagacaggctggagaaatattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ataaaagtctccacgtcattgttagaggctgccaggtcgagacaggctggagaaatattg 312
Query: 121 gagtcttagtcaccagactgtgacattattaggaggtggctgaacctactgaaggaagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gagtcttagtcaccagactgtgacattattaggaggtggctgaacctactgaaggaagtt 252
Query: 181 aggccattgagaatgtgtatctgctggctctctttgctttctggctgacttg 232
||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 251 aggccattgagaatgtg-acctgctggctctctttgctttctggctgacttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 636
Length adjustment: 9
Effective length of query: 228
Effective length of database: 627
Effective search space: 142956
Effective search space used: 142956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no280_d24.g1 MSMg01no280_d24.g1 CHROMAT_FILE:
MSMg01no280_d24.g1 PHD_FILE: MSMg01no280_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:03 2005
(238 letters)
>mm_chr11_48893363_48894000
Length = 638
Score = 439 bits (227), Expect = e-128
Identities = 233/235 (99%)
Strand = Plus / Plus
Query: 1 atgattatcaatatgatcaaggaaaaaggactcagtcagataaatgacaatcaggggtca 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 atgattatcaatatgatcaaggaaaaaggactcagtcagatgaatgacaatcaggggtca 260
Query: 61 acaaagggcatgataatggaagtgaataaaaagaaatactgaagaaacctgtgtcttata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaagggcatgataatggaagtgaataaaaagaaatactgaagaaacctgtgtcttata 320
Query: 121 tgaggctaaaattatttttttttgtaaatcaaatgctcagtggaaaggcacattaacaca 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 tgaggctaaaattatttttttttgtaaatcaaatgctcattggaaaggcacattaacaca 380
Query: 181 atggatcacctgaaagagagattatctgaagttttaggtatatatagataatata 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atggatcacctgaaagagagattatctgaagttttaggtatatatagataatata 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|