Query= MSMg01no280_f19.b1 MSMg01no280_f19.b1 CHROMAT_FILE:
MSMg01no280_f19.b1 PHD_FILE: MSMg01no280_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:11 2005
(355 letters)
>mm_chr11_114541322_114542076
Length = 755
Score = 673 bits (348), Expect = 0.0
Identities = 354/356 (99%), Gaps = 1/356 (0%)
Strand = Plus / Minus
Query: 1 gggttaactccttggggaactggcgtgacagcccgatgaccatgactcccaagttcagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gggttaactccttggggaactggcgtgacagcccgatgaccatgactcccaagttcagat 439
Query: 61 gtaatgaacgggcttcctcatcctgaccttggctcttttcccacggggctgagctctaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtaatgaacgggcttcctcatcctgaccttggctcttttcccacggggctgagctctaaa 379
Query: 121 gcctgctttttcctccgatctgcctccagctgagcatcctggtcttttcccagaattcca 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 378 gcctgctttttcctccgatctgcctccagctgagcatcctggtcttctcccagaattcca 319
Query: 181 tactctgtcctcaacgcactcagttgggtcaaaaagatggagtctatagcccacgctggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tactctgtcctcaacgcactcagttgggtcaaaaagatggagtctatagcccacgctggc 259
Query: 241 ctcaaactcttatgaagccaagagtgactttttgtttgtggttatttcattttattaa-t 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 258 ctcaaactcttatgaagccaagagtgactttttgtttgtggttatttcattttattaatt 199
Query: 300 ttttttaatggcagggtctctctatagccctggctagcctggaactcactatgtag 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ttttttaatggcagggtctctctatagccctggctagcctggaactcactatgtag 143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space: 258116
Effective search space used: 258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_f19.g1 MSMg01no280_f19.g1 CHROMAT_FILE:
MSMg01no280_f19.g1 PHD_FILE: MSMg01no280_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:11 2005
(316 letters)
>mm_chr11_114389770_114390485
Length = 716
Score = 596 bits (308), Expect = e-175
Identities = 314/316 (99%)
Strand = Plus / Plus
Query: 1 tctggaggagcagtcagtgctcttaactgctgagccatctctccagcagacacacatgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctggaggagcagtcagtgctcttaactgctgagccatctctccagcagacacacatgat 260
Query: 61 agtttcagaagatctaataccctcttctgacctctgcaggcacaaagcacacatggttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtttcagaagatctaataccctcttctgacctctgcaggcacaaagcacacatggttgc 320
Query: 121 acatgcctgcatgcagacaaaaaaatccacacataaaataaagtgaataagtctaattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatgcctgcatgcagacaaaaaaatccacacataaaataaagtgaataagtctaattta 380
Query: 181 aaaaaaaaatcatatggcatactttcttgtagagatgggacccgtacaaaagatgactcc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaaaaaatcatatggcatactttcttgtagagatgggacccgtacaaaagatgactcg 440
Query: 241 attcaaagagggatatccacctgtctcgggactggcacatcctctctaggcagactggta 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 attcaaagagggatatccacctgtctcgggactggcacagcctctctaggcagactggta 500
Query: 301 gctacatcatatttat 316
||||||||||||||||
Sbjct: 501 gctacatcatatttat 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
