Query= MSMg01no288_j08.b1 MSMg01no288_j08.b1 CHROMAT_FILE:
MSMg01no288_j08.b1 PHD_FILE: MSMg01no288_j08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:42 2005
(324 letters)
>mm_chr11_9148646_9149369
Length = 724
Score = 582 bits (301), Expect = e-171
Identities = 316/321 (98%), Gaps = 2/321 (0%)
Strand = Plus / Plus
Query: 4 ggaattctctgacaccatcaactctcactgttcttgtctatatacttctgactcttctta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctgacaccatcaactctcactgttcttgtctatatacttctgactcttctta 263
Query: 64 ctccagggtactcccatgcccagcacagaccatgactcctctcacccctgggtagcacca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctccagggtactcccatgcccagcacagaccatgactcctctcacccctgggtagcacca 323
Query: 124 tgcctagcacagactgtgactcttcataccccaggacag-cccggtgcctagcacagact 182
|||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||
Sbjct: 324 tgcctagcacagactgtgactcttcataccccaggaaagtcccg-tgcctagcacagact 382
Query: 183 ccccagtccttcccatgctgaggatattccatttatcagccatcagctatgagcccttct 242
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 383 ccccagtccttcccatgttgaggacattccatttatcagccatcagctatgagcccttct 442
Query: 243 ccactacccagtcccatttttcttgtctcatagcatctatgtcttcccacaatgctctct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ccactacccagtcccatttttcttgtctcatagcatctatgtcttcccacaatgctctct 502
Query: 303 gttccctgctaatgctcagtc 323
|||||||||||||||||||||
Sbjct: 503 gttccctgctaatgctcagtc 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_j08.g1 MSMg01no288_j08.g1 CHROMAT_FILE:
MSMg01no288_j08.g1 PHD_FILE: MSMg01no288_j08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:42 2005
(297 letters)
>mm_chr11_9320235_9320931
Length = 697
Score = 559 bits (289), Expect = e-164
Identities = 295/297 (99%)
Strand = Plus / Minus
Query: 1 aacctggttgggattaagttgaatgatggctcatctgagggtgggaaaggacttcaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aacctggttgggattaagttgaatgatggctcatctgagggtgggaaaggacttcaaagg 438
Query: 61 gaaggggtgctcactgcctggtggggttattttaccacttgctgcttagcaaactgagga 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 437 gaaggggtgctcactgcctggtggggttactttaccacttgctgcttagcaaactgagga 378
Query: 121 agaagagaattggggagcgtcatttttcctgcttctccttgccaaaactggatgtggtgg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 377 agaagagaattggggagcgtcatttttcctgcttctccttgccaaaactggatgtgctgg 318
Query: 181 agtcaggatctggagaaactgaatgtggaatttattcagactcatacattcacatttggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 agtcaggatctggagaaactgaatgtggaatttattcagactcatacattcacatttggc 258
Query: 241 cagattccacacggttcctttggcaagtcagagaggtaagagaacttggatgctgat 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cagattccacacggttcctttggcaagtcagagaggtaagagaacttggatgctgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
