Query= MSMg01no288_l19.b1 MSMg01no288_l19.b1 CHROMAT_FILE:
MSMg01no288_l19.b1 PHD_FILE: MSMg01no288_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:53 2005
(251 letters)
>mm_chr11_57928943_57929593
Length = 651
Score = 455 bits (235), Expect = e-132
Identities = 247/251 (98%)
Strand = Plus / Plus
Query: 1 ccagaaaagggcctcagatcctattacagatggttgtgagccaccttgtggttgctggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccagaaaagggcctcagatcctattacagatggttgtgagccaccttgtggttgctggga 260
Query: 61 tttgaactcagcacctctggaaggaatagtcagtgctcttaactactgagccatctctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgaactcagcacctctggaaggaatagtcagtgctcttaactactgagccatctctcc 320
Query: 121 agctcttcttttagcttatttatgtactctattaagttttaatatatatttgaagaggaa 180
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 321 agctcttcttttagcttatttatgtactccattaagttttaatatatatctgaagaggaa 380
Query: 181 aacactttgaaaaattatagtgaaagctgggtagtggtggtgtacaactttgagcccatt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 aacactttgaaaaattatagtgaaagctgggtagtggtggtgtacaactttgagcccagt 440
Query: 241 atttggaaggc 251
| |||||||||
Sbjct: 441 acttggaaggc 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no288_l19.g1 MSMg01no288_l19.g1 CHROMAT_FILE:
MSMg01no288_l19.g1 PHD_FILE: MSMg01no288_l19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:53 2005
(269 letters)
>mm_chr11_58109970_58110638
Length = 669
Score = 489 bits (253), Expect = e-143
Identities = 265/269 (98%), Gaps = 2/269 (0%)
Strand = Plus / Minus
Query: 2 gtctggggacagggaagga-taaggcacagaagtcagaatacaaccccatgtctgagaca 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gtctggggacagggaaggattaaggcacagaagtcagaatacaaccccatgtctgagaca 410
Query: 61 ttgtcttcatcaaacacagaacccacctaccgtgacaggtctccaacgtgaatcactggg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ttgtcttcatcaaacacagaacccacctaccgtgacaggtctccaacgtgaatcactgga 350
Query: 121 tattgtatgagcacaaggaaggatctggggtgacagctacatgatcctggcaaaaaaaga 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 349 tattgtatgagcacaaggaaggatctggggtgacagctacacgatcctggcaaaaaa-ga 291
Query: 181 aagtattctgaagagagacccttgggtcctccctttggacattagataattgagacaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aagtattctgaagagagacccttgggtcctccctttggacattagataattgagacaatg 231
Query: 241 ggcccagggaattggtattcctccacaag 269
|||||||||||||||||||||||||||||
Sbjct: 230 ggcccagggaattggtattcctccacaag 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 669
Length adjustment: 9
Effective length of query: 260
Effective length of database: 660
Effective search space: 171600
Effective search space used: 171600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
