Query= MSMg01no289_p14.b1 MSMg01no289_p14.b1 CHROMAT_FILE:
MSMg01no289_p14.b1 PHD_FILE: MSMg01no289_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:24 2005
(592 letters)
>mm_chr11_91763241_91764233
Length = 993
Score = 1062 bits (549), Expect = 0.0
Identities = 582/593 (98%), Gaps = 1/593 (0%)
Strand = Plus / Plus
Query: 1 atttggcacaagtaaataaaacacaaaactgagaacaaaacagcttcccttgtctcctgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 atttggcacaagtaaataaaacacaaaactgagaacaaaacagcttcccttgcctcctgt 260
Query: 61 ctatactccaattctgagaggaagatagtggttaaagggccagtgctaatataaatgttt 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 ctatactccaattctgagaggaagatggtggttaaagggccagtgctaatataaatgttt 320
Query: 121 aagtgaaaataggggcagaatttcaacttacttttccaagaatttgaggactgattaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtgaaaataggggcagaatttcaacttacttttccaagaatttgaggactgattaata 380
Query: 181 gatgacaagtggaaccactat-aaaaaaataagacttcagaatagtagattacattgcca 239
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 381 gatgacaagtggaaccactataaaaaaaataagactccagaatagtagattacattgcca 440
Query: 240 gctttgagaattttctttcctagtgaaggttgccttccccttatacagcactccacactt 299
|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 441 gctttgagaattttctttcctagtgaagcttgccttccccttatacagcactgtacactt 500
Query: 300 gcctatgcctttacttggaagattgatcaacagaaacgtggtaaatgcaataagaacaaa 359
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 gcctatgccttaacttggaagattgatcaacagaaaggtggtaaatgcaataagaacaaa 560
Query: 360 cactgatgggtatttgaagtagtagggagtacataaaagagtgtgttttgcaagctggat 419
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 cactgatgggtatttgaagtagtagggagtacataaaagaatgtgttttgcaagctggat 620
Query: 420 gctatatatcctagcactaaaaatcagtgagactgcacttaggagctagaggaaggtgga 479
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 gctatatatcctagcactaaaaatcagtgagactgcacttgggagctagaggaaggtgga 680
Query: 480 ttttgagtgtgagatcattcttggaggtttcacacatttaaaggtccccttggctatatg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttttgagtgtgagatcattcttggaggtttcacacatttaaaggtccccttggctatatg 740
Query: 540 agatcctgtctcaaaataataatgctgaaatgaaatataaagctactttgtta 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agatcctgtctcaaaataataatgctgaaatgaaatataaagctactttgtta 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 993
Length adjustment: 10
Effective length of query: 582
Effective length of database: 983
Effective search space: 572106
Effective search space used: 572106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_p14.g1 MSMg01no289_p14.g1 CHROMAT_FILE:
MSMg01no289_p14.g1 PHD_FILE: MSMg01no289_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:24 2005
(287 letters)
>mm_chr11_91933406_91934092
Length = 687
Score = 530 bits (274), Expect = e-155
Identities = 283/286 (98%)
Strand = Plus / Minus
Query: 1 cttagaatggatactagtagaatgaggtgggagacaaatggtgctactacagctgtgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cttagaatggatactagtagaatgaggtgggagacaaatggtgctactacagctgtgctg 241
Query: 61 ttatattttcaggaaaatgcctcctccacttttcaaaaagagaaactaaggctccaggtg 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttatattgtcaggaaaatgcctcctccacttttcaaaaagagaaactaaggctccaggtg 181
Query: 121 aaccagagccatgactcattgcaataacatttgcaagtgaggctctttgggcaggagggt 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 180 aaccagagccatgactcattgcaataacatttgcaagtaaggctctttgggcaggagggt 121
Query: 181 atactgtgtgacacattgtgacataccgtaacttccatggtgatatagttggtcttgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atactgtgtgacacattgtgacataccgtaacttccatggtgatatagttggtcttgttt 61
Query: 241 tatttctatttttatttgttttgttttctttcactagggaagttgc 286
||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 60 tatttctatttttatttgttttgttttctttcattagggaagttgc 15
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
