TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCACACTAATAGCATAAAATCATTTTAAATATAATTATTGTAGAAA
ATTTCTCAAATCTAGACAAAGATAGACCCATCCCGGTACAAGAGACATTA
TAATATCACATAGACAAGAACAAAAAAGAAATTCTCATGCTATATTATAA
TTAGAACATAAATATGTAAAATAAGGAACATGTATTAAATGTAGCAGAGA
TTAAAAACACTAATCCACATGTGAAGGCAGACTTCTTGAATAATAACAGC
TGATTTATTGACAGAGGCTTCAAAAGTCAGAGTATACTTCAAGTTCTGAA
AAACTACAACTACCAAGCCAGACTATTATACCTAACAAAACTCCCTATCA
TGAATGATGGAGAAAGAAAATTATCACATAACAAGCACATACTAAAGGAG
TTTACAACCAGTAACAAGCTCTACAAGATACTGGAAATAAGTCTTTAAAC
TGAAAAAAAATGATATTCTTAAAGAATTACAGAGTTAGAAACAAAATATG
TTAGAACAGTAGTTAATCAAATAAGAGTTAGGAAAACAAAACACTACAAA
AGTCAACAAAGCAATAAGAATTAACACACACCTTTCTATAATAAATCTTA
ACATTAATTAGGTTAATTATCCAACCAAATACACGCCTATAAAATTGGAT
TAANAGCAGGATCTATTTATTTTTTTATTTTCTGTATCTAATAAACACAC
CTGGCTCC

CCAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTATACTTAGAGATCTGAGTTTT
CTACCTGGACTCCATTGATGTGATATTCATATATTTATCTACATTTACTT
GACAGAAAGTACTACTGAGGACCAAATCTTCTTTAGTGGAATGCCCATTG
TTTTAGGTGCTGAGGGTTATCTAAATAAAAACCACACTCTGTGCCTAAAG
GGAATGACAGACTAACAAGGAACAGGTAGTGCAGGAGATGTGATGGATGA
GTCGGTTGTCATAGGTCAACAGAGGAGTTGGGAGGCATTGCTCTCTGTAC
TGAGGAATCTAAGGGCATCACAGAGGATGAAGCCCATGAGCTGAGATGTG
AGTTTGATCCACCGTTTCAAAGTAAGAGAATCATTGCTAAAAAGTTTTAA
GCAGGAGAACCTGTTCAGATAAATCATACACACTGCTCCTCAAGTTCAGT
GAATGGTTAAATGTTTGCGATGCTTGGGACATAGAGCAGGGGAAAGGAAA
GGTACAGATTGGATTGGAGAGAGTCACTTGAACTAAAGGTTGTGGAGTTT
GGCGCCAGGACATTGAGTGTTGATTTTTTTTCTTTTGACAGGGTAGCATT
GTGCTTCCTTGGACTGAACTCACTATAAAGGCCAGGCCATCCCCAAATCA
GTCCCTGTAAACAAGTGGGGTAGAATAAGGAGATGGTTCAGGGAGAAAGT
GCTGC

Query= MSMg01no290_k23.g1 MSMg01no290_k23.g1 CHROMAT_FILE:
MSMg01no290_k23.g1 PHD_FILE: MSMg01no290_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:18 2005
         (640 letters)



>mm_chr11_64612563_64613603
          Length = 1041

 Score = 1216 bits (629), Expect = 0.0
 Identities = 638/641 (99%), Gaps = 1/641 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   attatacttagagatctgagttttctacctggactccattgatgtgatattcatatattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 841 attatacttagagatctgagttttctacctggactccattgatgtgatatttatatattt 782

                                                                       
Query: 61  atctacatttacttgacagaaagtactactgaggaccaaatcttctttagtggaatgccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 atctacatttacttgacagaaagtactactgaggaccaaatcttctttagtggaatgccc 722

                                                                       
Query: 121 attgttttaggtgctgagggttatctaaataaaaaccacactctgtgcctaaagggaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 attgttttaggtgctgagggttatctaaataaaaaccacactctgtgcctaaagggaatg 662

                                                                       
Query: 181 acagactaacaaggaacaggtagtgcaggagatgtgatggatgagtcggttgtcataggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acagactaacaaggaacaggtagtgcaggagatgtgatggatgagtcggttgtcataggt 602

                                                                       
Query: 241 caacagaggagttgggaggcattgctctctgtactgaggaatctaagggcatcacagagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caacagaggagttgggaggcattgctctctgtactgaggaatctaagggcatcacagagg 542

                                                                       
Query: 301 atgaagcccatgagctgagatgtgagtttgatccaccgtttcaaagtaagagaatcattg 360
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atgaagcccgtgagctgagatgtgagtttgatccaccgtttcaaagtaagagaatcattg 482

                                                                       
Query: 361 ctaaaaagttttaagcaggagaacctgttcagataaatcatacacactgctcctcaagtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctaaaaagttttaagcaggagaacctgttcagataaatcatacacactgctcctcaagtt 422

                                                                       
Query: 421 cagtgaatggttaaatgtttgcgatgcttgggacatagagcaggggaaaggaaaggtaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagtgaatggttaaatgtttgcgatgcttgggacatagagcaggggaaaggaaaggtaca 362

                                                                       
Query: 481 gattggattggagagagtcacttgaactaaaggttgtggagtttggcgccaggacattga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gattggattggagagagtcacttgaactaaaggttgtggagtttggcgccaggacattga 302

                                                                       
Query: 541 gtgttgatttttttt-cttttgacagggtagcattgtgcttccttggactgaactcacta 599
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtgttgatttttttttcttttgacagggtagcattgtgcttccttggactgaactcacta 242

                                                    
Query: 600 taaaggccaggccatccccaaatcagtccctgtaaacaagt 640
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taaaggccaggccatccccaaatcagtccctgtaaacaagt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1041
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1031
Effective search space:   649530
Effective search space used:   649530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)