Query= MSMg01no294_g10.b1 MSMg01no294_g10.b1 CHROMAT_FILE:
MSMg01no294_g10.b1 PHD_FILE: MSMg01no294_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:04 2005
(310 letters)
>mm_chr11_67603510_67604218
Length = 709
Score = 526 bits (272), Expect = e-154
Identities = 299/308 (97%), Gaps = 5/308 (1%)
Strand = Plus / Plus
Query: 5 gaattcctagtgtctactcgcaatgaagccagtttggaaggactgcgaagtgagaggcag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctagtgtctactcgcaatgaagccagtttggaaggactgcgaagtgagaggcag 264
Query: 65 caatgccatgacatcttatcacagggaagggcagcgaatgtttggattgtgctgcttgag 124
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 265 caatgccatgacatcttatcacagggaaaggcagcgaatgcttggattgtgctgcttgag 324
Query: 125 ttaaacca-agaggcattcgtgcatctaaaaataaacccttgccaagc-tcgcaggcctt 182
|||||||| | ||||||||||||||||||||||||||||| ||||||| | |||||||||
Sbjct: 325 ttaaaccaca-aggcattcgtgcatctaaaaataaaccct-gccaagcgt-gcaggcctt 381
Query: 183 gtgggaggtggcactgtgctcgggacttcctggtgcactcacttatgacactgcatgagg 242
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 382 gtgggaggtggcactgtgctcgggacttcctggtgcactcagttaggacactgcatgagg 441
Query: 243 ctatcccctggcttaaaccggcgtgagattaagccacaggttagcaggcatgtggagcat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctatcccctggcttaaaccggcgtgagattaagccacaggttagcaggcatgtggagcat 501
Query: 303 tttggaaa 310
||||||||
Sbjct: 502 tttggaaa 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 709
Length adjustment: 9
Effective length of query: 301
Effective length of database: 700
Effective search space: 210700
Effective search space used: 210700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_g10.g1 MSMg01no294_g10.g1 CHROMAT_FILE:
MSMg01no294_g10.g1 PHD_FILE: MSMg01no294_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:05 2005
(284 letters)
>mm_chr11_67785820_67786503
Length = 684
Score = 540 bits (279), Expect = e-158
Identities = 282/283 (99%)
Strand = Plus / Minus
Query: 1 ttctgtaaaattcactgtattttatccaccctggagccatgcaggaaattgtgttccccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ttctgtaaaattcactgtattttatccaccctggagccatgcaggaaattgtgttccccc 600
Query: 61 agtctatgctcaaaagcaaagcccaacagttccctcaaccatacttcagatgacaaggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 agtctatgctcaaaagcaaagcccaacagttccctcaaccatacttcagatgacaaggtg 540
Query: 121 tcaggtcccattaccatcctgactggtctctgagcactctggtgtatttatagcccatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tcaggtcccattaccatcctgactggtctctgagcactctggtgtatttatagcccatgt 480
Query: 181 gaacactggagagtgcgtgctctgtttccatgaaaggaatgttaatcatgcatggctctt 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 479 gaacactggagagtgcgtgctctgtttccatgaaaggaatgttaaccatgcatggctctt 420
Query: 241 cttctacaactgtgggaattttctccaatcatcctcaaaaccc 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 cttctacaactgtgggaattttctccaatcatcctcaaaaccc 377
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
