Query= MSMg01no295_h16.b1 MSMg01no295_h16.b1 CHROMAT_FILE:
MSMg01no295_h16.b1 PHD_FILE: MSMg01no295_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:25 2005
(311 letters)
>mm_chr11_76451019_76451727
Length = 709
Score = 549 bits (284), Expect = e-161
Identities = 297/302 (98%), Gaps = 2/302 (0%)
Strand = Plus / Minus
Query: 5 gaattctttaagcaacaacaacaacaacaaaaaaaaagagtaatgtatcaagatctgttt 64
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 504 gaattctttaagcaacaacaacaacaac--aaaaaaagagtaatgtatcaagatctgttt 447
Query: 65 ctttgttcagcttcctctggggtacctgaatgtcccctggacttggagtctaaaagggct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ctttgttcagcttcctctggggtacctgaatgtcccctggacttggagtctaaaagggct 387
Query: 125 tgtcagtgcccagcactgtcaccagcaatgactcatttggaactgggcttcatgctatac 184
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tgtcagtacccagcactgtcaccagcaatgactcatttggaactgggcttcatgctatac 327
Query: 185 gcaggcctcttgacacacgactgtctgagcattgtgttctgcatccttagctgtatccat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gcaggcctcttgacacacgactgtctgagcattgtgttctgcatccttagctgtatccat 267
Query: 245 ctgggtggtgctgtctataaaactcactgtggttgtctacagactcagcgcaagatgcag 304
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 266 ctgggtggtgctgtctatataactcactgtggttgtctacagactcagtgcaagatgcag 207
Query: 305 cc 306
||
Sbjct: 206 cc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 709
Length adjustment: 9
Effective length of query: 302
Effective length of database: 700
Effective search space: 211400
Effective search space used: 211400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no295_h16.g1 MSMg01no295_h16.g1 CHROMAT_FILE:
MSMg01no295_h16.g1 PHD_FILE: MSMg01no295_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:26 2005
(284 letters)
>mm_chr11_76269284_76269967
Length = 684
Score = 520 bits (269), Expect = e-152
Identities = 269/269 (100%)
Strand = Plus / Plus
Query: 1 actgtgtggcttaattggacctcaacagagagtaacaccccaagagtgccacctccctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtgtggcttaattggacctcaacagagagtaacaccccaagagtgccacctccctgg 260
Query: 61 catcttaaggagactatgagggctaaagagagccactggaggtaacaagcttggaaagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcttaaggagactatgagggctaaagagagccactggaggtaacaagcttggaaagac 320
Query: 121 acaaggtccttgatgccaagaacaccttcagagcagtacggaaccaggcaggactttacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaaggtccttgatgccaagaacaccttcagagcagtacggaaccaggcaggactttacc 380
Query: 181 cttcttctgtagcttctgaatcgcttctctccactccgacctctcatagtcagaagacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttcttctgtagcttctgaatcgcttctctccactccgacctctcatagtcagaagacag 440
Query: 241 aagaaacaggtaactctggagggagggag 269
|||||||||||||||||||||||||||||
Sbjct: 441 aagaaacaggtaactctggagggagggag 469
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
