Query= MSMg01no296_d07.b1 MSMg01no296_d07.b1 CHROMAT_FILE:
MSMg01no296_d07.b1 PHD_FILE: MSMg01no296_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:20 2005
(317 letters)
>mm_chr11_99837966_99838682
Length = 717
Score = 574 bits (297), Expect = e-168
Identities = 306/309 (99%)
Strand = Plus / Minus
Query: 5 gaattctaggccagcttgggctacagagacctcagatctaaccaaatcaaagcagatcaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gaattctaggccagcttgggctacagagacctcagatctaaccaaatcaaagcagatcaa 313
Query: 65 acctgaccacatataaatatgtaaatactcaaatctgagatattgatcatggaggacagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 acctgaccacatataaatatgtaaatactcaaatctgagatattgatcatggaggacagc 253
Query: 125 ttaagaatattcacctaatagtaatcacacataccctgccccgtcccctgaatcagggtt 184
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttaaggatattcacctaatagtaatcacacataccctgccccgtcccctgaatcagggtt 193
Query: 185 tccctgtgtagccacggctgtcctggaactggctctaaagagcaggctggcctcaaactc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tccctgtgtagccacggctgtcctggaactggctctaaagagcaggctggcctcaaactc 133
Query: 245 agagatctgcctgcccctgtctcttgggtagtggggctaaaggcatgtaccatttaaggc 304
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 132 agagatctgcctgcccctgtctcttgagtagtggggctaaaggcatgtaccatctaaggc 73
Query: 305 ccttttttt 313
|||||||||
Sbjct: 72 ccttttttt 64
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_d07.g1 MSMg01no296_d07.g1 CHROMAT_FILE:
MSMg01no296_d07.g1 PHD_FILE: MSMg01no296_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:20 2005
(282 letters)
>mm_chr11_99628646_99629327
Length = 682
Score = 464 bits (240), Expect = e-135
Identities = 272/284 (95%), Gaps = 4/284 (1%)
Strand = Plus / Plus
Query: 1 tattgtgttaagcaaaagtagccatattcaaaaattcaagtatcaaatgtattctcttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tattgtgttaagcaaaagtagccatattcaaaaattcaagtatcaaatgtattctcttgt 256
Query: 61 atctttcacacatacatatatatgtatatgtgtgtgtgcatatatgtatgtatatatata 120
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 257 atctttcacacatacatatacatgtatatgtgtgtgtacatatatgtatgtatatatata 316
Query: 121 --ggtatatatgtgtatacctatatatatatgcacacacaca--tatatatatgcaacac 176
|| |||||| |||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 317 taggcatatatatgtacacctatatatatatgcacacacacacatatatatatgcaacac 376
Query: 177 acaaaaaaggaagatatttgaaattaaaatatatgcagtttgaaaataggaaagagaaag 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 acaaaaaaggaagatatttgaaattaaaatatatgcagtttgaaaataggaaagagaaag 436
Query: 237 gagattattatagagggtcatgtggggatagatgtgataaacac 280
|||||||||| |||||||||| ||| ||||||||||||||||||
Sbjct: 437 gagattattagagagggtcatttggagatagatgtgataaacac 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
