Query= MSMg01no296_h18.b1 MSMg01no296_h18.b1 CHROMAT_FILE:
MSMg01no296_h18.b1 PHD_FILE: MSMg01no296_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:41 2005
(318 letters)
>mm_chr11_43622295_43623011
Length = 717
Score = 571 bits (295), Expect = e-167
Identities = 310/317 (97%), Gaps = 5/317 (1%)
Strand = Plus / Minus
Query: 4 ggaattccaacttttgttttttcttaggttaactttacattgcagtgggaatacctgcag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ggaattccaacttttgttttttcttaggttaactttacattgcagtgggaatacctgcag 458
Query: 64 aaaagcatgttg--ccctgtagtatatcacgttcaacaagtgaacacatccctataaata 121
||||||||| || |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 457 aaaagcatggtggt---tgtagtatatcacgttcaacaagtgaacgcatccctataaata 401
Query: 122 acacccaaaatgagacagaaaagggtatcaataccccacagtgtcctcttcaggccaacc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 acacccaaaatgagacagaaaagggtatcaataccccacagtgtcctcttcaggccaacc 341
Query: 182 tctagcattacggtgtatctgcacaggatttgctaagacctgaaaatctgttttccccat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tctagcattacggtgtatctgcacaggatttgctaagacctgaaaatctgttttccccat 281
Query: 242 cttacttaatccattcccccttttctacggtgagagctgaatttcctctcctacagggat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 cttacttaatccattcccccttttctacggtgagagctgaatttcctctcctacagggat 221
Query: 302 tttcctatactgccatc 318
|||||||||||||||||
Sbjct: 220 tttcctatactgccatc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 717
Length adjustment: 9
Effective length of query: 309
Effective length of database: 708
Effective search space: 218772
Effective search space used: 218772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_h18.g1 MSMg01no296_h18.g1 CHROMAT_FILE:
MSMg01no296_h18.g1 PHD_FILE: MSMg01no296_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:41 2005
(282 letters)
>mm_chr11_43451995_43452675
Length = 681
Score = 538 bits (278), Expect = e-157
Identities = 281/282 (99%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 1 tcctgtctgcctcctacactgtaggaacactgtgtgctattattcctggctttacatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctgtctgcctcctacactgtaggaacactgtgtgctattattcctggctttacatgaa 260
Query: 61 tttgggaatttgaactaaagtcctcaaaattgtgtgacaggtgatttacctgctgagcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgggaatttgaactaaagtcctcaaaattgtgtgacaggtgatttacctgctgagcca 320
Query: 121 tcgctccagctcccaaaaggtgtaatctatctagatatggtggcctatggattataatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcgctccagctcccaaaaggtgtaatctatctagatatggtggcctatggattataatct 380
Query: 181 cagcactcaggagtcagcactgggcagatctctcttggagttagagacctggtaagacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagcactcaggagtcagcactgggcagatctctcttggagttagagacctggtaagacca 440
Query: 241 tatctctgaaacggaaaaggacaaaaaaaattaatatttagt 282
||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 tatctctgaaacggaaaaggacaaaaaaa-ttaatatttagt 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 681
Length adjustment: 9
Effective length of query: 273
Effective length of database: 672
Effective search space: 183456
Effective search space used: 183456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
