Query= MSMg01no299_g03.b1 MSMg01no299_g03.b1 CHROMAT_FILE:
MSMg01no299_g03.b1 PHD_FILE: MSMg01no299_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:17 2005
(452 letters)
>mm_chr11_44239633_44240484
Length = 852
Score = 775 bits (401), Expect = 0.0
Identities = 433/449 (96%), Gaps = 11/449 (2%)
Strand = Plus / Plus
Query: 1 tagcaattaattaatccagcagttcaatgacatcatttgcaagctcgggtcttttccatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagcaattaattaatccagcagttcaatgacatcatttgcaagctcgggtcttttccatc 260
Query: 61 agccttaatattttgtttttcttcctacaagatggctgctacattgccaaccaacatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccttaatattttgtttttcttcctacaagatggctgctacattgccaaccaacatgct 320
Query: 121 gccatgttatgcatcaaaactggaagggcagttctcttctaaaagagggtatgtgttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccatgttatgcatcaaaactggaagggcagttctcttctaaaagagggtatgtgttgtt 380
Query: 181 gttgttgctgctgctgctgctgctgctgttattattgctttgggtgtgtttgttagtttg 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 gttgttgctgctgctgctg---------ttattattgctttgggtgtgtttgttagtttg 431
Query: 241 gtttttttccttcaactaggaaagacattttttcccagagtcccatagcacctaggcaca 300
||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 432 gtttttt-ccttcaactaggaaagacattttt-cccagagtcccatagcacctagccaca 489
Query: 301 ttttaactgtaatgggagcttaaacaaaaagagaatctggtctttccacccaccgaaggc 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 490 ttttaactataatgggagcttaaacaaaaagagaatctggtctttccacccactgagggc 549
Query: 361 gaaggagctgagaatgggaaagactgtgggcagtgcctgcttccagagcatagaggagga 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aaaggagctgagaatgggaaagactgtgggcagtgcctgcttccagagcatagaggagga 609
Query: 421 acatgaaacccagagatggggctggagag 449
|||||||||||||||||||||||||||||
Sbjct: 610 acatgaaacccagagatggggctggagag 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_g03.g1 MSMg01no299_g03.g1 CHROMAT_FILE:
MSMg01no299_g03.g1 PHD_FILE: MSMg01no299_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:18 2005
(223 letters)
>mm_chr11_44402199_44402821
Length = 623
Score = 400 bits (207), Expect = e-116
Identities = 219/223 (98%)
Strand = Plus / Minus
Query: 1 tcttgctcatttacaatcaaccgttttgcacaccatttcttctgcaaagaagcccccatt 60
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 423 tcttgctcatttacaatcaaccgttttgcagaaaatttcttctgcaaagaagcccccatt 364
Query: 61 tctttatatctctagctagagggaaaacatgctgttttgttgaacaggaagaccctcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tctttatatctctagctagagggaaaacatgctgttttgttgaacaggaagaccctcctc 304
Query: 121 tcagctttgctaaacccatcgggctgggagagaatacggtttttaaaaagtcacttttat 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 303 tcagctttgctaaacccatcgggctgggagagaatacgggttttaaaaagtcacttttat 244
Query: 181 aaaaccagaaaatcattgctgtatcacatttcttaccttagaa 223
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aaaaccagaaaatcattgctgtatcacatttcttaccttagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 623
Length adjustment: 9
Effective length of query: 214
Effective length of database: 614
Effective search space: 131396
Effective search space used: 131396
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
