Query= MSMg01no305_p06.b1 MSMg01no305_p06.b1 CHROMAT_FILE:
MSMg01no305_p06.b1 PHD_FILE: MSMg01no305_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:31 2005
(358 letters)
>mm_chr11_22943614_22944371
Length = 758
Score = 615 bits (318), Expect = e-180
Identities = 333/338 (98%), Gaps = 1/338 (0%)
Strand = Plus / Minus
Query: 14 gaatt-catatgaacaagttaataaagaaggccagactgtatgtggtggttcagacaatt 72
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 663 gaattccatatgaacaagttaataaagaagaccagactgtatgtggtggttcagacaatt 604
Query: 73 gatcctaacattgaaaggcaaagactgccagatttctatgagtttgaagccagtgtgatt 132
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 603 gatcctaacattgaaaggcaaagactgccagatttctatgagtttgaagtcagtgtgatt 544
Query: 133 gtgataatgagttccagaccagccaggattgcacagtaagacaaagttacaacaaatatt 192
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 543 gtgataatgagttccagaccagccagggttgcacagtaagacaaagttacaacaaatatt 484
Query: 193 aaagaaaatatatggaaatagtgatgattttactattttttattaaagatcataggattg 252
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 483 aaagaaaatatatggaaatagtgatgattttactattttttattaaagatcacaggattg 424
Query: 253 ttttagtttacatgacatgatctttctaaaatgccatgttatatttagggttttgttttg 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ttttagtttacatgacatgatctttctaaaatgccatgttatatttagggttttgttttg 364
Query: 313 ttttgttttgttttgttttgttttgttttgttttgttt 350
||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttttgttttgttttgttttgttttgttttgttttgttt 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_p06.g1 MSMg01no305_p06.g1 CHROMAT_FILE:
MSMg01no305_p06.g1 PHD_FILE: MSMg01no305_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:31 2005
(343 letters)
>mm_chr11_22772634_22773376
Length = 743
Score = 625 bits (323), Expect = 0.0
Identities = 338/343 (98%)
Strand = Plus / Plus
Query: 1 agcagacagaagaacgaagctggtccttacccttcacacatgcggtgtttggtgtctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagacagaagaacgaagctggtccttacccttcacacatgcggtgtttggtgtctgct 260
Query: 61 ttgttctccttcgtagacgtgccgcctcacaaacagcaagataacggtatgtcaggtctt 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 ttgttctccttcgtagacgtgccgcctcacaaacagcaagataacggtgtgtcaggtctt 320
Query: 121 ctgagatcctgcacatcctttccacgacattttcagacatattagtctcaatgggtgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgagatcctgcacatcctttccacgacattttcagacatattagtctcaatgggtgttc 380
Query: 181 tgtgttccaagatgtcacaagccactgttttccctttcctttagccaatgctgtacagtt 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 tgtgttccaagatgtcacaagccactgttttccctttcctttagccaatggtgtacagtt 440
Query: 241 ggccattacagaaacgatagccaggcactgccagaagaccagacccttatttatagtcat 300
||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 agccattacagaaatgatagccaggcactgccagaagaccagacccttacttatagtcat 500
Query: 301 caatggaacaggcatttgcctcaagactggaaaatcctcaggc 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caatggaacaggcatttgcctcaagactggaaaatcctcaggc 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
