TTTTXXXXXXXXXXXXXXXXXXXXXXXXNATTCCGAGGTCCGCGNGATTC
ATTAGAATTACCCGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTTGCTCGCTTTAAACACNANGTCTCATTGTATAACCCT
GACTGACCAATTTGCTATGCAGACCAGGATAGCCCCAAACTCAAACTCTT
CCTCTCAAGTGGCAGAATTTAGAGGCGTTGGGCCACCGCCACCTGGTTTT
TTTCTCAAATTCATTTTGCTTTGATTTTTTATTTGCACCCATTTTGATTG
CTCATCATACNTGTTCAATCGCTTTTGACGCATCAAAGCGTCCACACCGA
CACATGTTTTTTTTACCCCCCCCCCCACCCATTGGTTCTCTCCTACCAGG
TTGGACTTCACACCCCCCCTTTTAAAAAAAAAATTGTGAAGCATGTCCCT
TGACTTGATGACTAACTAAGATAATCCGGAACCCTGCTTAGTCTACAAAC
TTGCCATTACATTTCTTTATACCCTCGCGTGTAATGGCGATTTAACACAT
AAGACCACGCCAATAAAATATATCTTTAAGAGGATACCGCCAAAACTCTT
TTAAAACCTGATCCACAAACCCCTATAATCCGAATCTCCAAACCAAGACG
CCCTATTTTTTTTTTTTTTTCACTCGAAAATAAGGCCCCCCCCCCCGCCT
TTTATCCCTTCCGTATTTCTTTTTGTCCCCCGTCATTAACCATCTCTTTA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXGGTAAGACATCCGCTTCTCCAAA
TGTGTTTTTGTGTATATATTTTTATGATTTGCGTTTTTACTTCTGTGTGC
GTGTGGGTACGTGCACATGCCAGCACATGTGCAGACATCAGAGGACACTT
GTGGGAGTGGGTTCCCCACTAGCATATCGGTTCTGGGTGTTAAACTCAGG
TCCTCAGGCTTGGTGGCAAGTGTTTACCTGCTGAGCCACCCTAGCCCTGA
AGTGTGCTTTTATTTAATGACATTTAGCAATGTCTGTTTTAGCGCACTCT
TACAGACTCCCACGGTGTAACCAATTCAAAACTGTAGCCTTGGATACTTG
GTTTGCTGTGTGCGCCTTTTACTAAGCAAGGTTAAAAAATAAGGTCAACT
CTATAGATGTAATAGAGCTGACTTACTGGTTAGAAAGCAAGGTCGTAATG
ACTTTCCCCAGTCATTCTGATTTTGTTCTCTTTAAAAAATTGTTTTTCTT
ACAATAGCAGCCATGTTCTTCCTCAGTGATGTCCTTTGTCTCTTTAGAAT
GGAAGTCCGGTGCAGGAGTGTGGTTGTTCATATGTATCTGTTAGCTAGCC
TTTGAGTCACTTATTCAGTGGCACTGATGAGTTTGCTATAGAGAGACTAG
GATATTTTTTTTTTCTTGCTCTGTAGACCAGGTAGCCTTA

Query= MSMg01no307_a16.g1 MSMg01no307_a16.g1 CHROMAT_FILE:
MSMg01no307_a16.g1 PHD_FILE: MSMg01no307_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:59 2005
         (663 letters)



>mm_chr11_109226877_109227938
          Length = 1062

 Score = 1237 bits (640), Expect = 0.0
 Identities = 658/664 (99%), Gaps = 2/664 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggtaagacatccgcttctccaaa-tgtgtttttgtgtatatatttttatgatttgcgttt 59
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggtaagacatccgcttctccaaaatgtgtttttgtgtatatatttttatgatttgcgttt 259

                                                                       
Query: 60  ttacttctgtgtgcgtgtgggtacgtgcacatgccagcacatgtgcagacatcagaggac 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttacttctgtgtgcgtgtgggtacgtgcacatgccagcacatgtgcagacatcagaggac 319

                                                                       
Query: 120 acttgtgggagtgggttccccactagcatatcggttctgggtgttaaactcaggtcctca 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acttgtgggagtgggttccccactagcatatcggttctgggtgttaaactcaggtcctca 379

                                                                       
Query: 180 ggcttggtggcaagtgtttacctgctgagccaccctagccctgaagtgtgcttttattta 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggcttggtggcaagtgtttacctgctgagccaccctagccctgaagtgtgcttttattta 439

                                                                       
Query: 240 atgacatttagcaatgtctgttttagcgcactcttacagactcccacggtgtaaccaatt 299
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 440 atgacatttagcaatgtctgttttagcgcactcttacagactcccacagtgtaaccaatt 499

                                                                       
Query: 300 caaaactgtagccttggatacttggtttgctgtgtgcgccttttactaagcaaggttaaa 359
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 500 caaaactgtagccttggatacttggtttgctgtgtgtgccttttactaagcaaggttaaa 559

                                                                       
Query: 360 aaataaggtcaactctatagatgtaatagagctgacttactggttagaaagcaaggtcgt 419
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 560 aaataaggtcaactctatagatgtaatagaactgacttactggttagaaagcaaggtcgt 619

                                                                       
Query: 420 aatgactttccccagtcattctgattttgttctctttaaaaaattgtttttcttacaata 479
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aatgactttccctagtcattctgattttgttctctttaaaaaattgtttttcttacaata 679

                                                                       
Query: 480 gcagccatgttcttcctcagtgatgtcctttgtctctttagaatggaagtccggtgcagg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gcagccatgttcttcctcagtgatgtcctttgtctctttagaatggaagtccggtgcagg 739

                                                                       
Query: 540 agtgtggttgttcatatgtatctgttagctagcctttgagtcacttattcagtggcactg 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 agtgtggttgttcatatgtatctgttagctagcctttgagtcacttattcagtggcactg 799

                                                                       
Query: 600 atgagtttgctatagagagactaggatattttttttttcttgctctgtagaccaggtagc 659
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 800 atgagtttgctatagagagactaggatattttttttt-cttgctctgtagaccaggtagc 858

               
Query: 660 ctta 663
           ||||
Sbjct: 859 ctta 862


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1062
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1052
Effective search space:   686956
Effective search space used:   686956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)