Query= MSMg01no312_b06.b1 MSMg01no312_b06.b1 CHROMAT_FILE:
MSMg01no312_b06.b1 PHD_FILE: MSMg01no312_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:04 2005
(222 letters)
>mm_chr11_46183943_46184564
Length = 622
Score = 364 bits (188), Expect = e-105
Identities = 210/218 (96%), Gaps = 2/218 (0%)
Strand = Plus / Minus
Query: 5 gaattcactatgtagggaaggctgctatcagatttgtagtaatcctcctgcctctgtttc 64
||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 491 gaattcactatgtagggaaggctgctatcagatttttagtaatcctcctgc--ctgtttc 434
Query: 65 ttaaatactataataactgcagtgctaagctatgtatttattttttgccacgtggctgag 124
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 433 ttaaatactagaataactgcagtgctaagctatgtatttattttttgccatgtggctgag 374
Query: 125 actggtctggaactcccagtgcttctccttcagcctgcagagtgctatgatcgcaagcgt 184
||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 373 actggcctggaacccccagtgcttctccttcagcctacagagtgctatgatcgcaagcgt 314
Query: 185 gcaccactatgtctggctatggagtatggtttttacac 222
||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gcaccactatgtctggctatggagtatggtttttacac 276
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 622
Length adjustment: 9
Effective length of query: 213
Effective length of database: 613
Effective search space: 130569
Effective search space used: 130569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no312_b06.g1 MSMg01no312_b06.g1 CHROMAT_FILE:
MSMg01no312_b06.g1 PHD_FILE: MSMg01no312_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:05 2005
(248 letters)
>mm_chr11_46029507_46030154
Length = 648
Score = 464 bits (240), Expect = e-135
Identities = 246/248 (99%)
Strand = Plus / Plus
Query: 1 cagataatgcactctgtggttggtttcaccttgaaagactaaaccaaccaccaagggggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 cagataatgcactctgtggttggtttcaccttgaaagactaaaccaaccacaaagggggg 260
Query: 61 aaatgaacttagcaaccttagaaacagcttgtccacaaaagcccgctacactctatctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatgaacttagcaaccttagaaacagcttgtccacaaaagcccgctacactctatctac 320
Query: 121 tatgcctagagccataatatgtaaacaacacctacaaaccaatggggaagcctgagtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgcctagagccataatatgtaaacaacacctacaaaccaatggggaagcctgagtaaa 380
Query: 181 gagttcacaaaactcttaacaggattttatctaatagggggtacaaatgaccaaccacac 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 gagttcacaaaactcttaacaggattttatctaagagggggtacaaatgaccaaccacac 440
Query: 241 acagcaag 248
||||||||
Sbjct: 441 acagcaag 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
