Query= MSMg01no316_b13.b1 MSMg01no316_b13.b1 CHROMAT_FILE:
MSMg01no316_b13.b1 PHD_FILE: MSMg01no316_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:46 2005
(676 letters)
>mm_chr11_26294686_26295761
Length = 1076
Score = 1205 bits (623), Expect = 0.0
Identities = 661/675 (97%), Gaps = 4/675 (0%)
Strand = Plus / Plus
Query: 4 gaattctttgtttttccctgaacaccattttttaatggtgttatttgattttctggagtt 63
||||||||||||| | |||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctttgtttagctctgagccccattttttaatggtgttatttgattttctggagtt 263
Query: 64 caccttcttgagttctttatatatatattgggtattagtcccgtatctgatttaggatag 123
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 264 caccttcttgagttctttatatatatattgggtatttgtcccgtatctgatttaggatag 323
Query: 124 gtgaagatcctttcccaatctattggtggcctttttgtcttattgacggtgtcttttgcc 183
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 324 gtgaagatcctttcccaatctgttggtggcctttttgtcttaatgacggtgtcttttgcc 383
Query: 184 ttgcagaagctttgcaattttatgaggtcccatttgtcgattctcgatcttacagcacaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgcagaagctttgcaattttatgaggtcccatttgtcgattctcgatcttacagcacaa 443
Query: 244 gccattgctgttcttttcaggaatttttcccttgttcctctatcttcgaggcttttcttg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gccattgctgttcttttcaggaatttttcccttgttcctctatcttcgaggcttttcttg 503
Query: 304 tcttaatgtcattttgatttgcttagttttctttctgagtttagtcaatatggtcatagc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcttaatgtcattttgatttgcttagttttctttctgagtttagtcaatatggtcatagc 563
Query: 364 ttttgtcagtttctggtcttggcttttagatttttcagtattgaaatgttcatttcttga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttttgtcagtttctggtcttggcttttagatttttcagtattgaaatgttcatttcttga 623
Query: 424 tattgtagtctgtatgtaattggtgcatgtttctgggctctgttctccttggcttcatca 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 624 tattgtagtctgtatgtaattggtgcatgtttctgggctctgttctccttggctccatca 683
Query: 484 ttacctttgcttctagtgctctgtgtttgtgtcatagctccatg--gactggggccacag 541
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 684 ttacctttgcttctagtgctctgtgtttgtgtcatagctc--tgcggactggggccacag 741
Query: 542 atctttggatgttgtgttttgctgcttgaagtagtttgtgaaattcctaattcaagaata 601
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 atctttgggtgttgtgttttgctgcttgaagtagtttgtgaaattcctaattcaagaata 801
Query: 602 ccctcttctgttggtaaaggaaaatgcagtttatttaatgatttatttgggggaggggtt 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ccctcttctgttggtaaaggaaaatgcagtttatttaatgatttatttgggggaggggtt 861
Query: 662 gagggagtgattata 676
|||||||||||||||
Sbjct: 862 gagggagtgattata 876
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_b13.g1 MSMg01no316_b13.g1 CHROMAT_FILE:
MSMg01no316_b13.g1 PHD_FILE: MSMg01no316_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:46 2005
(555 letters)
>mm_chr11_26449205_26450161
Length = 957
Score = 980 bits (507), Expect = 0.0
Identities = 534/549 (97%), Gaps = 11/549 (2%)
Strand = Plus / Minus
Query: 1 acagtgaaagacatgtgtaaggagatctcacagtattttccagtgtgcctaccctgaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 acagtgaaagacatgtgtaaggagatctcacagtattttccagtgtgcctaccctgaagg 481
Query: 61 acacactgttatacagccagtgcttgttcatgtacacagttcttggtacttttaataaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 acacactgttatacagccagtgcttgttcatgtacacagttcttggtacttttaataaga 421
Query: 121 tctttgcagatgacttttttcatgtgtaagactatgttaggattgcaatacagtatgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tctttgcagatgacttttttcatgtgtaagactatgttaggattgcaatacagtatgttg 361
Query: 181 tctaaaatgagacttttcaagttaatttagtggtttaa--tttttttttttagtagaaat 238
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 360 tctaaaatgagacttttcaagttaatttagtggtttaatttttttttttttagtagaaat 301
Query: 239 ctggtgcctatttttggtgagaggaattctataactattacatattttacatatggagcc 298
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ctggtgcctatttttagtgagaggaattctataactattacatattttacatatggagcc 241
Query: 299 ttatattttcacagttgaaatataatttatctttaggatatttaggataattcttcctag 358
||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 240 ttatattttcacagttgaaatataatttatc---------tttaggataattcttcctag 190
Query: 359 taaaattaattattgtttttctttcataggagtatcaagaaaatggcccattattttcag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 taaaattaattattgtttttctttcataggagtatcaagaaaatggcccattattttcag 130
Query: 419 agcttaaattttatcagagagctgcaaaaagagaatgtagcaagtaaaatgagttaacca 478
|||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||
Sbjct: 129 agcttaaattttatcagagagctgcaaaaagagaatgtagtaagttaaatgagctaacca 70
Query: 479 gatactgccatgtatacacttgctcaagcgaatgttaacattttggtctttttctggtct 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gatactgccatgtatacacttgctcaagcgaatgttaacattttggtctttttctggtct 10
Query: 539 tctggaaaa 547
|||||||||
Sbjct: 9 tctggaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 957
Length adjustment: 10
Effective length of query: 545
Effective length of database: 947
Effective search space: 516115
Effective search space used: 516115
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
