Query= MSMg01no317_m19.b1 MSMg01no317_m19.b1 CHROMAT_FILE:
MSMg01no317_m19.b1 PHD_FILE: MSMg01no317_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:51 2005
(243 letters)
>mm_chr11_22923998_22924640
Length = 643
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%)
Strand = Plus / Minus
Query: 1 ccagttgtggtggcacacaccaataactcctgcactgcacttagaacccaaaggcaggag 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 571 ccagttgtggtggcacacaccaataactcctgcactgcacttagaaggtaaaggcaggag 512
Query: 61 ttacaaacaagttcaccttggctatgcaggagtttggggctgagaatcttgagaccaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ttacaaacaagttcaccttggctatgcaggagtttggggctgagaatcttgagaccaagt 452
Query: 121 ctcaaaaatcaaggttgacacaaagcacggaggggccttatatactgctctgtggcttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ctcaaaaatcaaggttgacacaaagcacggaggggccttatatactgctctgtggcttac 392
Query: 181 aagttcctcttttgtgaaaggattaagggaagcagatcagcgtgggttctgatcctagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aagttcctcttttgtgaaaggattaagggaagcagatcagcgtgggttctgatcctagct 332
Query: 241 tta 243
|||
Sbjct: 331 tta 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no317_m19.g1 MSMg01no317_m19.g1 CHROMAT_FILE:
MSMg01no317_m19.g1 PHD_FILE: MSMg01no317_m19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:51 2005
(264 letters)
>mm_chr11_22761123_22761788
Length = 666
Score = 495 bits (256), Expect = e-144
Identities = 263/266 (98%), Gaps = 2/266 (0%)
Strand = Plus / Plus
Query: 1 acaaagctggattcttggtgggcattttgttattgtatttcccccttaaatggctctccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaaagctggattcttggtgggcattttgttattgtatttcccccttaaatggctctccg 260
Query: 61 aagccacagacatgctttcaaggattgctaggcaagaagttttgagtaaagtcagctggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagccacagacatgctttcaaggattgctaggcaagaagttttgagtaaagtcagctggc 320
Query: 121 aagcaacagggaaataaagcttgagtctttcagagctgccaaaagctgcccaggccatgt 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcaacagggaaagaaagcttgagtctttcagagctgccaaaagctgcccaggccatgt 380
Query: 181 agttttgtttttgtctttttttttt--aaaggcgttttctccttggtgccattgagtgca 238
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 agttttgtttttgtcttttttttttttaaaggcgttttctccttggtgccattgagtgca 440
Query: 239 gctggaaatgttccatccagcttcca 264
||||||||||||||||||||||||||
Sbjct: 441 gctggaaatgttccatccagcttcca 466
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 666
Length adjustment: 9
Effective length of query: 255
Effective length of database: 657
Effective search space: 167535
Effective search space used: 167535
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
