Query= MSMg01no321_j02.b1 MSMg01no321_j02.b1 CHROMAT_FILE:
MSMg01no321_j02.b1 PHD_FILE: MSMg01no321_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:20 2005
(641 letters)
>mm_chr11_8396199_8397240
Length = 1042
Score = 1127 bits (583), Expect = 0.0
Identities = 627/645 (97%), Gaps = 7/645 (1%)
Strand = Plus / Plus
Query: 4 ggaattcattctgtagatcacgctagcctcaaactcaga------ccctccgaggtgctg 57
||||||||||||||||| || |||||||||||||||||| |||||||||||||||
Sbjct: 198 ggaattcattctgtagaccaggctagcctcaaactcagagactctccctccgaggtgctg 257
Query: 58 ggattaaaggcatgcaactgccgctgcttgtgagagacgtttttagctggtaagctctat 117
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 258 ggattaaaggcatgcaactgccgctgcttgtgagagacgtttttagctggtgagctctat 317
Query: 118 tactatccccaagtgaaagaaaccggaaaatgatagcagacacacgggaaaaatggcagc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tactatccccaagtgaaagaaaccggaaaatgatagcagacacacgggaaaaatggcagc 377
Query: 178 acctaggagcctaatctcagtcagtccagttctgagcccccaagaggttctcataaatcc 237
|||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 378 acctaggagcctgatctcagccagtccaattctgagcccccaagaggttctcataaatcc 437
Query: 238 acatagctcagacaggcaaccctcaacaagaactggagacatcccctgaactatgcaatt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 acatagctcagacaggcaaccctcaacaagaactggagacatcccctgaactatgcaatt 497
Query: 298 ccaattgcatgcatagctagctctcaacctcagaaaacgtccaagaaatctacaccgaaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ccaattgcatgcatagctagctctcaacctcagaaaacgtccaagaaatctacaccgaaa 557
Query: 358 gtagaagctggcctctcctgctagaagatgtgggagacaggggagggccaggaaggctga 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gtagaagctggcctctcctgctagaagatgtgggagacaggggagggccaggaaggctga 617
Query: 418 ggaagctgcccaaggcaacagctgcgcggctgcccctggaggtgcacagcggg-agaaca 476
||||||||||||| ||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct: 618 ggaagctgcccaaagcaacagctgcgcagctgcccctggaggcccacagcggggagaaca 677
Query: 477 agaagctctggctctcactgtgtccaccctgtttgctggcaaaaggccaccacttatcaa 536
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 678 agaagctctggctctcactgtgtccaccctgtttgctggcaaaaggccaccacttaacaa 737
Query: 537 gagagacaaggatctcagctctggacacactaggtgcctaagcttctctttcatcctaga 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gagagacaaggatctcagctctggacacactaggtgcctaagcttctctttcatcctaga 797
Query: 597 agaccagattctcactctgccatttctctgtaaaattttcagtcc 641
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 agaccagattctcactctgccatttctctgtaaaattttcagtcc 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1042
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1032
Effective search space: 651192
Effective search space used: 651192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_j02.g1 MSMg01no321_j02.g1 CHROMAT_FILE:
MSMg01no321_j02.g1 PHD_FILE: MSMg01no321_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:20 2005
(292 letters)
>mm_chr11_8553666_8554356
Length = 691
Score = 511 bits (264), Expect = e-149
Identities = 285/292 (97%), Gaps = 1/292 (0%)
Strand = Plus / Minus
Query: 1 agccatgcaccacactgccaacccagccctgctccaggcagactggttcagcccttggtg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 491 agccatgcaccacactgccaacccagccctgctccaggcagactgggtcagttcttggtg 432
Query: 61 ccaggatgagctgggagggtgagtgtggctgagctgacagagacttttgtctgactatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ccaggatgagctgggagggtgagtgtggctgagctgacagagacttttgtctgactatga 372
Query: 121 tctctattgtcctgtgtccctttaacctctggaattaccgtctggcctttcgttgtttcc 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tctctattgtcccgtgtccctttaacctctggaattaccgtctggcctttcgttgtttcc 312
Query: 181 gccacgttctgcccgttgtcagaaccacgtgtcttgggaacttcagttccctggctcctg 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gccacgttctgcccgtcgtcagaaccacgtgtcttgggaacttcagttccctggctcctg 252
Query: 241 tggtgccagatggtttttgtgcaaataaggggagagcctcagcctggagctg 292
||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 251 tggtgccagatgg-ttttgttcaaataaggggagagcctcagcctggagctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
